Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4621g00005 ATGGTTCGCTATTCGAACCATCCCTTGTTCTCCACCGTCGAAACAAGGCCTACACTGCGCCTCTTGAACACCGGCGAAGTGTCCCACCTGAGCTTCTTGCAGATATTGTTGAGCACGCTTAAACATGAAGCAGCTAACCGCACTAAGGAATATGCCACAAGGGAAGCAAGCATATCTGGGTTCGGAACAATGTATTCTCTACTTCGGTGCACGCAGGACCTATCATCCCAAGATTGCAGAATTTGTCTGAGTGCTGTGATTGGAGACCTTTCAACATGGTGCTGTTTGGGAAAACAAGGAGGAAGAGTTCTATGGGTTGCAACGTTCGCTATGAGTTATATCCTTTTTGTAAGTCTGATGATCAGCCAGAAGCGACAGCGCCTACACTGCCTGCACTTTCTCCTCCAACAAGTTCTTCAGATCCTCAAGCATCCTTTACTATTTTCTGTGTGTCTAGTTGGAAATGAAAGCCATAATTTAGAGCCTCTACAATTTGGTTTGGCCACTATTGAAGCTGCAACAAATAAGTTTTTTCATGAAAAATGTTTAGGCCAAGGTGGATTTGGACAGGTTTACAAGGGTGTTCTTTCAAATGGTCAAGAATTAGCTGTCAAGAGACTTTCAAAAAATTCTGGTCAAGGTGGAGAAGAATTCAAGAACGAGATTTTATTGATTGCCAAACTTCAGCACATAAACTTGGTGGCCTTGCTTGGATTTTGCATAGAAGAACAAGAGAAAATCCTTGTTTATGAATATGTTCGGAACCTTGACTAA 774 0.4264 MVRYSNHPLFSTVETRPTLRLLNTGEVSHLSFLQILLSTLKHEAANRTKEYATREASISGFGTMYSLLRCTQDLSSQDCRICLSAVIGDLSTWCCLGKQGGRVLWVATFAMSYILFVSLMISQKRQRLHCLHFLLQQVLQILKHPLLFSVCLVGNESHNLEPLQFGLATIEAATNKFFHEKCLGQGGFGQVYKGVLSNGQELAVKRLSKNSGQGGEEFKNEILLIAKLQHINLVALLGFCIEEQEKILVYEYVRNLD 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4621g00005 257 ProSiteProfiles Gnk2-homologous domain profile. 10 118 IPR002902 -
Pral4621g00005 257 Gene3D - 23 113 IPR038408 -
Pral4621g00005 257 Pfam Protein tyrosine and serine/threonine kinase 180 255 IPR001245 GO:0004672|GO:0006468
Pral4621g00005 257 ProSiteProfiles Protein kinase domain profile. 177 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4621g00005 257 SUPERFAMILY Protein kinase-like (PK-like) 160 255 IPR011009 -
Pral4621g00005 257 Pfam Salt stress response/antifungal 33 108 IPR002902 -
Pral4621g00005 257 Gene3D Phosphorylase Kinase; domain 1 149 252 - -
Pral4621g00005 257 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 59 255 - -
Pral4621g00005 257 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 144 252 - -
Pral4621g00005 257 ProSitePatterns Protein kinases ATP-binding region signature. 183 205 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4621g00005 Pral-Chr4621 64788 66173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4621g00005 1 255 Receptor kinase-like Gene Family AT4G23220 35.880 1.34e-47 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4621g00005 Stress-antifung 9.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4621g00005 - - pcin:129286093 247.284