Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4621g00002 ATGGAGAAGAGGCAAAGAGATTTTCTCTTATTTGCGGGCTTACTGTGCCTAAGTGCCCTAGCTGAGTCTGCAACTGTAAGAACAATACCAGTCGGAGTGATTCTGGATTTGAGTTCATCACTTGGTCCCACGGTTCATGATTGCATCAACATCGGACTCCAAGATTTGCATTCCTCAGAGTCTTCCCATGAAACAAAGCTCCAAGTTCATTTCAGGGATTCCCATGGCGATCTCCTCACTGCAGCTTCTGCAGCTTGGGATCTAATAAATGGAACAAAGGTGCATGCAATCCTGGGACCCCAAAACTATGAGCAAGCAAGGTATGTTGTAGAACTTGGTAAGCAGTACGATGTACCAGTGATTTGGTTTTCTCCATCTGGTCCATCTCTTTTGCCACCTCGTTCCCCATTTTCCATCTACTCCCGCTCCACTAGAAGCCATTGCCTTCAGTTCGAAGCTGTCGCGGCCATTATCAGAGCTTATAATTGGCAGTCTGTGGTCCCCATTTATGAAGAGCCAGACTTCGGCAATGACCTCATTCCATGTCTCACTTATGCCTTGCAAGAAATGGACACTCTAGTGCCTAACGTAATTAGCATTCGTCGAGGTTCCAATGATTCTGAAATCGCCGGCGAGCTCGACAAGATAAAACCCGAACGAACATATGTGTTTCTTGCCCATATGACGGTGGAGCTTTGGTCAAGACTTGTGAAACATGCAAAAGATAAAGGGATGATGAGTCAAGGACACGCTTGGATACTTACACAAGGCTTATCCTCAGTGATAGATCCGGAAGCTAGAGATATAAAAGTGAAAGGCTACATGGATGGTGCTTTGGGTGTGAGGCCATCAGTTTCTGTGAGGCAATCACTGAATGTTTCCAGCATTATAGCTAAGCGCTTTTCCTTAGCGAGAACATTAAAGTTTGAGTACAATAAAACTCTTTCTCTATCTGGCATGTGGGCTTACGACACTATCACGGCATTGGCCAATGCGGTAGAGAAGGCCAGCTTAGGTGATTCTACTTTCGGATATGGGAATGAAAGTAGAGTTGATCTTGAAGATGGAGGAATGCGCAACGAAACAGGCCCAAAACTTCGCAGAAAAATTCTGGCTACTAATTTCGTAGGCCTGTCAGGGAATTTCAGTTTGAGGCTAGGACAACTAGAACCATCAAAAGTTGTGGTATACAATATTGTGGAAGGCCTAAAAGAAAGGATCATTGGGTATTGGAGACCCGAAATAGGACTTTTTCAAAATTACAGTGAAAATGGCGAACCAGCTGGTAAATACAAACTAAGGGACCCGATATGGCCGGGTAACACGACGGAGAGACCACCAAAGTTGAAAATTGGGGTCCCAAAGACGCATTTTACTCAATTTGTTGATGTTAATGTGGGTGTAGAAGGGCAGAATGTATCAACTTCTGGCTTGGCTGTTGATGTATTTAAAAGAGTGGTTGATGTTTTGCCATTTCCTTTACCTTATGAGTTTGTGCCTGTGAGCAATGGAGAGCTGACTCCCTCCACCTATAATGATCTTCTCTGCCATATCACAGACAAGGCAAGTCTTCATTCATCTCTGTTGCTTCCGATCAATTGTTTTACTTTCATCAGCTTTTATGTTTCTCAGTTTGTCATAAAGGAAAGTCAGGCATGTGTTTGCATAGTTTCATTGATGATTTTATTCCCCCTGAAGCTTGGATATACTCAAGAACATCCCAGGAAATGA 1731 0.4367 MEKRQRDFLLFAGLLCLSALAESATVRTIPVGVILDLSSSLGPTVHDCINIGLQDLHSSESSHETKLQVHFRDSHGDLLTAASAAWDLINGTKVHAILGPQNYEQARYVVELGKQYDVPVIWFSPSGPSLLPPRSPFSIYSRSTRSHCLQFEAVAAIIRAYNWQSVVPIYEEPDFGNDLIPCLTYALQEMDTLVPNVISIRRGSNDSEIAGELDKIKPERTYVFLAHMTVELWSRLVKHAKDKGMMSQGHAWILTQGLSSVIDPEARDIKVKGYMDGALGVRPSVSVRQSLNVSSIIAKRFSLARTLKFEYNKTLSLSGMWAYDTITALANAVEKASLGDSTFGYGNESRVDLEDGGMRNETGPKLRRKILATNFVGLSGNFSLRLGQLEPSKVVVYNIVEGLKERIIGYWRPEIGLFQNYSENGEPAGKYKLRDPIWPGNTTERPPKLKIGVPKTHFTQFVDVNVGVEGQNVSTSGLAVDVFKRVVDVLPFPLPYEFVPVSNGELTPSTYNDLLCHITDKASLHSSLLLPINCFTFISFYVSQFVIKESQACVCIVSLMILFPLKLGYTQEHPRK 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4621g00002 576 SUPERFAMILY Periplasmic binding protein-like I 28 447 IPR028082 -
Pral4621g00002 576 Gene3D - 58 391 - -
Pral4621g00002 576 PANTHER OS06G0188250 PROTEIN 13 394 - -
Pral4621g00002 576 Gene3D - 146 416 - -
Pral4621g00002 576 Pfam Receptor family ligand binding region 54 399 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4621g00002 Pral-Chr4621 13075 17230 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4621g00002 3 504 Ion Channels AT5G27100 33.650 1.94e-81 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4621g00002 K05387 - qsu:111985481 375.941