Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4620g00014 ATGAATATGCCATTTCTGAAATTGCTATCCCATTTTCTGCTTCTCACCTTCTTGAATTTCGCTTCCACTTCTGAAGCAGACAGCCCTACTTACTCTGGCCACAACTGCACAAGGAATAAAAACTTCACTTCCAATAGCCCCTACGAGTTCAACCTTAACACTCTTTTAATTTCCTTCTATTCCATGGCCGCCGACACTAACACCACTCCTGAATTCAACACCACCAGCTTTGGCCGCACAAACACGAGCGACGCCGTATATGGAGAGTACATGTGTCGAGGTGACGTCCCCACTCAGATCTGTCGAGATTGCATTCGGGACGCCACATATAGAATAGCCTCGATGTGTCCCTACGACAAAGAGGCAATCATCTGGTACGACGAGTGCTTCCTCCGCTATTCCGACCGCTCTTTCTTCTCCACCCTCCAACAACAGCCTGTTCAGCCTGTTCCTAGCCCTTCTGCCGTCCCTTGTCCGCATATGACAGACAAGGAATTGTACAAGACATTGAATGATGCGGTGGTGGAGGCAGTGACATCAGATACCAAGAAATTCGCAACAAAAGAAGCATACTTGAGTAATGGAAGATCGGTATACACTCTTGCACAGTGCACGCCGGATCTGTCCCTACAATTCTGTGTTGAGTGTCTACATGGCCTTATAGAAGATATTCTGAAGGAGGAGGACTACCAGAGTGGTGGATTTCAGAATCCGAGCTGCAATTTGAGATTCGAAAGATACCGATTTTATTATAAGGACGACCAGCCTCCCTCCAATGGTTCTACCTTTCAAGGGCTTGGAAGTCCTACTCTTGCGTACCAGAACTGCTCGACCACCAAAAATTTTACTGCCAACGATCCCTACCTAAACAACCTCAAAAGTCTCACTCTCGAGCTCTCCATGTCATCCGACGACACCAAAAGCAATGGATTCCACAGCACCACAGTCGGAAGCAATTCCGACACTACCGTCTACGGCCTCTTCATGTGTCGGGGTGACGTGCCCCTTGGGCTCTGCCATGAATGCGTCAGTAAAGGAATTGAAGTACTGAACTCTGCATGTCCCTCTTCGAAGGAGGCTATCATTTGGTATGACATGTGCATGCTTCGCTACTCCAATCGCTCTTTCTTCTCTACCCAAGACACACAACCTATACATACAGAAGCTGGCGGGGATATGCTTAGAAACCAAACAGATGGCTTCAATCGGCTATTAGCTGCTACATTGAGTGCTCTAGTGAAGACGATATCAAACTCACCGCCCGTAGGAGCGAAGAATTTTGCAACAAAAAAAGGAGTCAGCCCTTCAGAGCTTACACCGTTGTATACTCTTGCACAATGCACTCCAAACCTGTCTAGTCAAGATTGCCAAAAATGTCTACAGGATGCTCAGGAACATATGACGTCATGTTGTCTTGGAAAGCGAGGAGGAAATGTCATGAGTCCTAGCTGCAACTTGAGGTTTGAATTGTATCGATTTTATGTTGACAGTAAAAGTGCTGTTTCGGGAAATACAGTCGGAGCTGAAGGAGCCACATTAGAGTCATTGCAATTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCACTTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCATTCTTCCCGATGGTAGCAAAATAGCTGTAAAGAGATTGTCAGAAAAATCAAGTCAGGGCTTATTAGAGTTCAAGAATGAGGTTTTACTAATTGCCAAACTTCAACACAGAAACCTGGTTGCATTATTAGGATTTTGCTTGAAAGATCAAGAGAAAATACTTGTCTATGAATACGTTCCTAACAAGAGCCTCGATTATTTTTTATTTGGTTCACAAAAGTCAAGAGTGTTAAATTGGCCAGAGCGTCACAAAATTATAGGAGGAATTGCTCGAGGAGTTCTTTATCTTCATGAATACTCACGTGTTAAGATAATACATCGAGATCTCAAACCTAGCAATATTTTGTTAGATGATGAGATGAATCCGAAAATTTCTGATTTTGGAATGGCGAGAATTGTTAGCATTAATGAAACTAGGGGAAACACGAATAGAATTGTTGGAACATTGGGTTACATGTCTCCAGAATATATCAAATTTGGACTATTTTCTGAGAAATCAGATATTTACAGCTTTGGAGTTATTGTTTTAGAAATTATAAGTGGAAAGAATATATCTTCTCAATGTGAATCACATGAATCTCAATATGCTGGTGGACTCTTAAGCGATGCTTGGAAGCATTGGAGGGATGACAATTTGGTAGCGATATTGGATTCGAATCTGACAGAAGCTGGGTCACACAGCGAAATAATCAAATGCATCCATATTGGCTTGTTGTGTGTTCAAGGAAATCCAGGAGTTAGGCCTTCCATGAACAAAGTTGTTCAATATCTGAGTAATGATTCAATTCAACTGCCAATTCCTCAAGAACCAGCATTCTTCATCCATAGTCAAATGGAACCAGCGGAAACCAGTAGGTCAATGGAGGCTCAACTTGCCAACCATAATCAATATTCCATCAATGAAATGTCGGAAAATATAATGTCTCCTCGCTAG 2574 0.4281 MNMPFLKLLSHFLLLTFLNFASTSEADSPTYSGHNCTRNKNFTSNSPYEFNLNTLLISFYSMAADTNTTPEFNTTSFGRTNTSDAVYGEYMCRGDVPTQICRDCIRDATYRIASMCPYDKEAIIWYDECFLRYSDRSFFSTLQQQPVQPVPSPSAVPCPHMTDKELYKTLNDAVVEAVTSDTKKFATKEAYLSNGRSVYTLAQCTPDLSLQFCVECLHGLIEDILKEEDYQSGGFQNPSCNLRFERYRFYYKDDQPPSNGSTFQGLGSPTLAYQNCSTTKNFTANDPYLNNLKSLTLELSMSSDDTKSNGFHSTTVGSNSDTTVYGLFMCRGDVPLGLCHECVSKGIEVLNSACPSSKEAIIWYDMCMLRYSNRSFFSTQDTQPIHTEAGGDMLRNQTDGFNRLLAATLSALVKTISNSPPVGAKNFATKKGVSPSELTPLYTLAQCTPNLSSQDCQKCLQDAQEHMTSCCLGKRGGNVMSPSCNLRFELYRFYVDSKSAVSGNTVGAEGATLESLQFNLATIEAATDKFSLENRIGKGGFGEVYMGILPDGSKIAVKRLSEKSSQGLLEFKNEVLLIAKLQHRNLVALLGFCLKDQEKILVYEYVPNKSLDYFLFGSQKSRVLNWPERHKIIGGIARGVLYLHEYSRVKIIHRDLKPSNILLDDEMNPKISDFGMARIVSINETRGNTNRIVGTLGYMSPEYIKFGLFSEKSDIYSFGVIVLEIISGKNISSQCESHESQYAGGLLSDAWKHWRDDNLVAILDSNLTEAGSHSEIIKCIHIGLLCVQGNPGVRPSMNKVVQYLSNDSIQLPIPQEPAFFIHSQMEPAETSRSMEAQLANHNQYSINEMSENIMSPR 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4620g00014 857 ProSiteProfiles Gnk2-homologous domain profile. 382 493 IPR002902 -
Pral4620g00014 857 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Pral4620g00014 857 Gene3D - 392 493 IPR038408 -
Pral4620g00014 857 Gene3D - 30 138 IPR038408 -
Pral4620g00014 857 Gene3D - 268 376 IPR038408 -
Pral4620g00014 857 Gene3D - 152 249 IPR038408 -
Pral4620g00014 857 SUPERFAMILY Protein kinase-like (PK-like) 515 833 IPR011009 -
Pral4620g00014 857 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 495 605 - -
Pral4620g00014 857 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 138 - -
Pral4620g00014 857 ProSiteProfiles Gnk2-homologous domain profile. 30 138 IPR002902 -
Pral4620g00014 857 FunFam cysteine-rich receptor-like protein kinase 10 606 811 - -
Pral4620g00014 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Pral4620g00014 857 CDD STKc_IRAK 536 804 - -
Pral4620g00014 857 ProSiteProfiles Protein kinase domain profile. 530 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4620g00014 857 Pfam Protein kinase domain 531 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4620g00014 857 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 269 376 - -
Pral4620g00014 857 Gene3D Transferase(Phosphotransferase) domain 1 606 811 - -
Pral4620g00014 857 Pfam Salt stress response/antifungal 165 247 IPR002902 -
Pral4620g00014 857 Pfam Salt stress response/antifungal 36 135 IPR002902 -
Pral4620g00014 857 Pfam Salt stress response/antifungal 276 373 IPR002902 -
Pral4620g00014 857 Pfam Salt stress response/antifungal 397 491 IPR002902 -
Pral4620g00014 857 ProSiteProfiles Gnk2-homologous domain profile. 270 376 IPR002902 -
Pral4620g00014 857 SMART serkin_6 530 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4620g00014 857 ProSiteProfiles Gnk2-homologous domain profile. 144 249 IPR002902 -
Pral4620g00014 857 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 857 - -
Pral4620g00014 857 Gene3D Phosphorylase Kinase; domain 1 496 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4620g00014 Pral-Chr4620 145529 150557 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4620g00014 271 857 Receptor kinase-like Gene Family AT4G23150 40.214 1.37e-150 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4620g00014 Pkinase 8.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4620g00014 - - pcin:129286968 743.036