Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4620g00013 ATGGTTCGCTATTCGAACCATCCCTTGTTCTCCACCGTCGAAACAAGGCCTACACTGCGCCTCTTGAACACCGGCGAAGTGTCCCCCCTGAGCTTCTTGCAGATATTGTTGAGCACGCTTAACCATGAAGCAGCTAACCGCACTAAGAAATATACCACAAGGGAAGCAAGCATATCTGGGCTCGGAGCAACGAGGAAGAGTTCTATGAGTTGCAACGTTCGCTATGAGTTATATCCTTTTCATAAGTCTGATGATCAGCCAGAAGCGACGGCGCCTACACCGCCTGCGTTTTCTCCTCCAACAAGTTCTTCAGATCCTCAAGTTGGAAATGAAAGCCATAATTTAGAGCCTCTACAATTTGGTTTGGCCACTATTGAAGCTGCAACAAATAAGTTTTTTCATGAAAAATGTTTAGGCCAAGGTGGATTTGGACAAGTTTACAAGGGTGTTCTTTCAAATGGTCAAGAAATAGCTGTCAAGAGACTTTTAAAAAATTCTGGTCAAGGTGGAGAAGAATTCAAGAACGAGGTTTTATTGATTGCCAAACTTCAGCGCATACACTTGGTGGCCTTGCTTGGATTTTGCATAGAAGAACAAGAGAAAATCCTTGTTTATGAATATGTTCGGAACCTTGACTCCTTTTTATTTGTTTTGACAATCTATACCTTCTTTAACTCTTACTGA 684 0.4225 MVRYSNHPLFSTVETRPTLRLLNTGEVSPLSFLQILLSTLNHEAANRTKKYTTREASISGLGATRKSSMSCNVRYELYPFHKSDDQPEATAPTPPAFSPPTSSSDPQVGNESHNLEPLQFGLATIEAATNKFFHEKCLGQGGFGQVYKGVLSNGQEIAVKRLLKNSGQGGEEFKNEVLLIAKLQRIHLVALLGFCIEEQEKILVYEYVRNLDSFLFVLTIYTFFNSY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4620g00013 227 Gene3D Phosphorylase Kinase; domain 1 101 207 - -
Pral4620g00013 227 ProSiteProfiles Protein kinase domain profile. 132 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4620g00013 227 MobiDBLite consensus disorder prediction 83 112 - -
Pral4620g00013 227 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 69 218 - -
Pral4620g00013 227 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 100 207 - -
Pral4620g00013 227 Pfam Protein tyrosine and serine/threonine kinase 135 212 IPR001245 GO:0004672|GO:0006468
Pral4620g00013 227 SUPERFAMILY Protein kinase-like (PK-like) 115 215 IPR011009 -
Pral4620g00013 227 ProSitePatterns Protein kinases ATP-binding region signature. 138 160 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4620g00013 Pral-Chr4620 142341 143772 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4620g00013 70 216 Receptor kinase-like Gene Family AT4G23130 42.000 6.71e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4620g00013 PK_Tyr_Ser-Thr 5.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4620g00013 - - pcin:129286093 189.119