Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4620g00012 ATGGCGGAGTTGTTGAAGAAAAGCTTGAAAGCTCTCTTAAGTGTGAGTGTGGCCTTAGTACTGTTATGGCTTAGACCTTCCATGGCGGCCAAACCAGATGGAGTGCCAGTAGGCGTCATTCTTGACCTGAATTCAGAACTTGGCAAAATGGTTAACAACAGCCTCGCCCTTGCCGTCGAAGATACAGAGCGTTATACAGCCACCAAGATTCGCCTTATAATCCGGAATGTTTCTCAGAACGACGCCGTCGCTGCAGCAGGAAATGCTTCTGAACTAATTGAGAAACACAAAGTGCGTGCCATTCTGGGGCCCCAAAATTCAGAGCAAGCAGGTTTTATAGTGGAACTTGGCTTGGAATCCCAAGTACCTGTTATTTGGTTTCCCATAACTGGCCCATCCCTTTTGCCACCTCCATCACCATCCTCCAATCAAGGCCTTAATTGCTTTCAGTTCCAAGCTATAGCTGCCACCATTGAAGCTCTTGGGTGGCAGTCAATCGTCCCCATTTTTGAAGACACTGAATATGGCGGTCACCTTATTCCATGCCTCAGCAATGTCTTGAAAGATATGGGCATACGAATGGTTAACATAACTGCCATTGATCCAGATTCAACAGATGTTGAAATTGACGACATTCTCGTCAAGTTAAACAACAGGCGAACACATGTATTTCTTGTCCATATGAGCATGGATTTGGGAATAAGATTTATTCAGTCTGCAGAAGAACAAGACATGATGGGAGAAGGATATGCTTGGATACTTACCCAGGGGTTATCTTCTTTAACAGATCCTCAAGTTACGACTGGGAACCCTTTGAAAGGATACATGCAAGGTGCATTGGGAGTGAGGCCAATGGATTCGAACAAAACACGTTGGCGTAGGTGGACACAGAGTTATTTTGACTACAGGTTCAATAGTACCCTATCAGTCTATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTATGGCATTAGAGAAGCCAGGCGCAGACAATAATGGCACAAAACTTCAAAGTGAAATTTGGGATACTAATTTCACAGGCTTGTCAGGGATAAATTTTAATTTAAAAGGAGGACAACTAGATCAATCGGTGCTTGAAGTATACAATGTGATAGGACCGAGAGAAAGGGTCATTGGTTATTGGAAACCTGAAACTGGACTTGTTCAAAATTTTAGTAAAGGTGCTAAGATATCTGGTAAATACCAACTAAAGGATCCATTGTGGCCGGGTGACACATTGGATAAACCACCAAAGTTGAGGATTGGAGTCGTAGCAACAAATTCTTTTCCTGAATTGGTGAGTGTAGATAATTCGACTACGCCGGTGATGATTCATGGCTTTGCTTTTAATGTGTTCTTAAAAGTTGTCGATGTTTTGCCATTTCCGCTCGATTATGAGTTTGTCCCCTTGCCAAACAAAAGTAGAAGCGGATCTTGA 1443 0.4324 MAELLKKSLKALLSVSVALVLLWLRPSMAAKPDGVPVGVILDLNSELGKMVNNSLALAVEDTERYTATKIRLIIRNVSQNDAVAAAGNASELIEKHKVRAILGPQNSEQAGFIVELGLESQVPVIWFPITGPSLLPPPSPSSNQGLNCFQFQAIAATIEALGWQSIVPIFEDTEYGGHLIPCLSNVLKDMGIRMVNITAIDPDSTDVEIDDILVKLNNRRTHVFLVHMSMDLGIRFIQSAEEQDMMGEGYAWILTQGLSSLTDPQVTTGNPLKGYMQGALGVRPMDSNKTRWRRWTQSYFDYRFNSTLSVYGWWAYHTIEALAMALEKPGADNNGTKLQSEIWDTNFTGLSGINFNLKGGQLDQSVLEVYNVIGPRERVIGYWKPETGLVQNFSKGAKISGKYQLKDPLWPGDTLDKPPKLRIGVVATNSFPELVSVDNSTTPVMIHGFAFNVFLKVVDVLPFPLDYEFVPLPNKSRSGS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4620g00012 480 Gene3D - 154 321 - -
Pral4620g00012 480 PANTHER OS06G0188250 PROTEIN 16 390 - -
Pral4620g00012 480 Pfam Receptor family ligand binding region 55 372 IPR001828 -
Pral4620g00012 480 Gene3D - 29 153 - -
Pral4620g00012 480 SUPERFAMILY Periplasmic binding protein-like I 30 384 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4620g00012 Pral-Chr4620 105592 108007 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4620g00012 35 465 Ion Channels AT2G29120 33.333 1.67e-68 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4620g00012 K05387 - qsa:O6P43_022275 334.724