Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4620g00010 ATGCAGAGAAGGCGAAGAGCAATTGTCATACTTACGGTGGGCTTAGTATGCCTAATGATTACCCTAACACAGTCTGAAACTGAATCTATACCAGTGGGAGTGATTCTGGATTCGGATTCATCCCTTGGTTCCATGGCTCTCAGCTGCATCAACATCTCACTCCGTGATTTCTATTCCACGCATGATTCTAATTCAACAAAGCTCCAACTTCATTTCAGGGATTCCGGAAAGAATCTCACCACTGCAGCTTCTGCAGCTCGAGATCTAATTAACAAGGAAAAGGTGCATGCAATCCTGGGACCTAAAAATTCAGAGCAAGCAAGGTTTGTTGTAGAGCTTGGTAACAAGTCTGGTGTACCTGTGATTTGGTTTTCTTTATCTGGTCCATCTCTTTTGCCGCCTCGTTCCCGATTCCTCATCCATTCCATCTCCACTGGAAGCCAGTGCTCTCAGTTCGAAGCTATAGCAGCCATCATCCAAGCTTATAATTGGCAATCTGTGATCCCCATTTATGAAGAGCCAGAATTCGGCAATGACCTCATTCCATGTCTCTCTTATGCCTTGCAAGACATGGACACTCGAATGCCTTATACAAGTTCCCTTCGTCAGGATTCCTCGGATGATCAAATCACCCAAGAGCTTAAAAACATAAAAGGCAACCGAACATATGTATTTCTTGCCCATATGACCGTAGACCTTTGGTCAAGGCTATTGAAACGTGCACAAAAGGAAGGGCTGATGAGTGAAGGATACGTTTGGATACTTACGCAAGGCCTATCTTCTGTGCTAAATCCCGAAGCTCTAGATAAGAAGGCGAAAGGCTACATGGATGGTGCTTTGGGTGTGAAGCCATCATTGGATGTTTCCAACATAACTAAGCGCGCTTCCTTAGCGACAACATTAAAGTCCAAGTACGGTAAAACTCTCTCTCTATATGGCCTATGGGCTTATGACACTATCACAGCGTTGGCCAATGCGGTAGAGAAGGCCGAATTAGTTAATTCTGCTTCCAGATATAGGATTCAAAGCGGAGTTGATCTTCGCAATGAAACAGGCCCAGAACTTCGCAAAGCAATTCAGGATACTGATTTCCAAGGCCTATCAGGAGATTTCAATTTGAGCCAAGGACAACTAGAAACATCACAAATTGTAGTATACAATGTGAAAGGCCAAAATGAAAGCATCATTGGACATTGGAGCCCCGAAAATGGCCTTAAGCTTATTCACAATCACAGTGAAGGTAACGCAACGGAGAGACTAGCAAAGTTGAAAATTGGGGTCCCAAGAACGCATTTTACTGAATTTGTTAATTACTCGTCTGATCCTGAAGAAGGGCAGAATAAATCAGCTGCCGGTGGCTTTGCTGTTGATGTGTTCAAAAGAGTGGTTGATGTTTTGCCATTTTCTCCATCTTATGACTTTGTGCCCGTAAACATTAATGGAGAGCAGACTCCCTCGAGCTACGATGATCTTCTCTGCCAAATCAAAAACAAGAATCTTGATATTATAATTGGAGACATTACAATCGTAGCGAGTCGCACAAAATGTGTTGATTTCACAGTGCCGTATTTAGATTCAAGCATGGCAATGGTGGTAAAGGTGAGGTCCGACTCCAAAAATGGGTGGATTCTCCTCACACCTTTTGATTGGTTACTATGGCTAGTTCTTGCTGTGATTTTTGTGGCATGA 1689 0.4334 MQRRRRAIVILTVGLVCLMITLTQSETESIPVGVILDSDSSLGSMALSCINISLRDFYSTHDSNSTKLQLHFRDSGKNLTTAASAARDLINKEKVHAILGPKNSEQARFVVELGNKSGVPVIWFSLSGPSLLPPRSRFLIHSISTGSQCSQFEAIAAIIQAYNWQSVIPIYEEPEFGNDLIPCLSYALQDMDTRMPYTSSLRQDSSDDQITQELKNIKGNRTYVFLAHMTVDLWSRLLKRAQKEGLMSEGYVWILTQGLSSVLNPEALDKKAKGYMDGALGVKPSLDVSNITKRASLATTLKSKYGKTLSLYGLWAYDTITALANAVEKAELVNSASRYRIQSGVDLRNETGPELRKAIQDTDFQGLSGDFNLSQGQLETSQIVVYNVKGQNESIIGHWSPENGLKLIHNHSEGNATERLAKLKIGVPRTHFTEFVNYSSDPEEGQNKSAAGGFAVDVFKRVVDVLPFSPSYDFVPVNINGEQTPSSYDDLLCQIKNKNLDIIIGDITIVASRTKCVDFTVPYLDSSMAMVVKVRSDSKNGWILLTPFDWLLWLVLAVIFVA 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4620g00010 562 Gene3D - 147 402 - -
Pral4620g00010 562 SUPERFAMILY Periplasmic binding protein-like II 422 559 - -
Pral4620g00010 562 Gene3D - 419 546 - -
Pral4620g00010 562 Pfam Ligated ion channel L-glutamate- and glycine-binding site 435 534 IPR019594 GO:0004970|GO:0016020
Pral4620g00010 562 Gene3D - 41 381 - -
Pral4620g00010 562 SUPERFAMILY Periplasmic binding protein-like I 26 404 IPR028082 -
Pral4620g00010 562 Pfam Receptor family ligand binding region 51 390 IPR001828 -
Pral4620g00010 562 PANTHER OS06G0188250 PROTEIN 11 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4620g00010 Pral-Chr4620 71490 75978 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4620g00010 8 561 Ion Channels AT2G29120 36.210 9.12e-109 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4620g00010 K05387 - qsa:O6P43_022275 412.149