Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4620g00006 ATGACGTTATGTTGTCTTGGACAGCGAGGAGGAAAAGTCATGAGTCCTAGCTGCAACTTGAGGTTTGAATCGTACCGATTTTATGATGACAGTAAAAGTGCTGTTTCGATGCCTCCTGCATATCCCCCGACTCCCGAAGTTCACATTTCGGGAAATACAGGAAAAGATCAGGACCACTCACGAACAATTATAACAGCGGTGTCCCTTACTGTTGTCTCAATCATGCTTTTTTGTTTCGGCTTCTATTACTGGAAGAGAAAAAAGAGCAACAGTTATAAGGCCATTCTGAAGAAAAATTTCGGAGCTGAGGGAGCCACATTAGAGTCATTGCAATTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCACTTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCATTCTTCCTGATGGTAGCAAAATAGCTGTAAAGAGATTGTCAGAAAAATCAAGTCAGGGCTTATTAGAGTTCAAGAATGAGGTTTTACTAATTGCCAAGCTTCAACACAGAAACTTGGTTGCATTATTAGGATTTTGCTTGAAAGATCAAGAGAAAATACTTGTCTATGAATACGTTCCTAACAAGAGCCTCGATTACTTTTTATTTGGTTCACAAAAGTCAAGAGTGTTAAATTGGCCAGAGCGTCACAAAATTATAGGAGGAATTGCTCGAGGAGTTCTTTATCTTCATGAATGCTCACGCGTTAAAATAATACATCGAGATCTCAAACCTAGCAATATTTTGTTAGATGATGAGATGAATCCAAAAATTTCTGATTTTGGAATGGCGAGAATTGTTGGCATTAATGAAACTAGGGGAAACACGAATAGAATTGTTGGGACACTGGGTTACATGTCTCCAGAATATATCAAGTTTGGACTATTTTCTGAAAAATCAGATATTTACAGCTTTGGAGTCATTGTTTTAGAAATTATAAGTGGAAAGAATATATCTTCTCAATGTGAATCACATGAATCTCAATATGCTGGTGGACTCTTAAGCGATGCTTGGAAGCATTGGAGGGATGACAATTTGATAGCGATATTGGATTCGAATTTGACAGAAGCTGGGTCACATAGTGAAATAATCAAATGCATCCATATTGGCTTGCTGTGTGTTCAAGGAAATCCAGGAGTTAGGCCTTCCATGAACAAAGTTGTTCAATATCTGAGTAATGATTCAATTCAGTTGCCAATTCCTCAAGAACCAGCATTCTTCATCCATAGTCAAATGGAACCAGCGGAAAGCAGTAGGTCAATGGAGGCTCAACTTGCCAACCATAATCAATATTCCATCAATGAAATGTCGGAGAATATAATATCTCCTCGCTAG 1356 0.3835 MTLCCLGQRGGKVMSPSCNLRFESYRFYDDSKSAVSMPPAYPPTPEVHISGNTGKDQDHSRTIITAVSLTVVSIMLFCFGFYYWKRKKSNSYKAILKKNFGAEGATLESLQFNLATIEAATDKFSLENRIGKGGFGEVYMGILPDGSKIAVKRLSEKSSQGLLEFKNEVLLIAKLQHRNLVALLGFCLKDQEKILVYEYVPNKSLDYFLFGSQKSRVLNWPERHKIIGGIARGVLYLHECSRVKIIHRDLKPSNILLDDEMNPKISDFGMARIVGINETRGNTNRIVGTLGYMSPEYIKFGLFSEKSDIYSFGVIVLEIISGKNISSQCESHESQYAGGLLSDAWKHWRDDNLIAILDSNLTEAGSHSEIIKCIHIGLLCVQGNPGVRPSMNKVVQYLSNDSIQLPIPQEPAFFIHSQMEPAESSRSMEAQLANHNQYSINEMSENIISPR 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4620g00006 451 ProSiteProfiles Protein kinase domain profile. 124 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4620g00006 451 FunFam cysteine-rich receptor-like protein kinase 10 200 405 - -
Pral4620g00006 451 SUPERFAMILY Protein kinase-like (PK-like) 108 429 IPR011009 -
Pral4620g00006 451 Pfam Protein kinase domain 125 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4620g00006 451 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 85 199 - -
Pral4620g00006 451 CDD STKc_IRAK 130 398 - -
Pral4620g00006 451 SMART serkin_6 124 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4620g00006 451 Gene3D Phosphorylase Kinase; domain 1 85 199 - -
Pral4620g00006 451 Gene3D Transferase(Phosphotransferase) domain 1 200 405 - -
Pral4620g00006 451 ProSitePatterns Protein kinases ATP-binding region signature. 130 152 IPR017441 GO:0005524
Pral4620g00006 451 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 450 - -
Pral4620g00006 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4620g00006 Pral-Chr4620 59468 61924 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4620g00006 4 418 Receptor kinase-like Gene Family AT4G23190 49.296 1.70e-136 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4620g00006 Pkinase 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4620g00006 - - pcin:129286968 632.869