Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4620g00005 ATGGTTCGCTATTCGAACCATCCCTTGCTCTCCACCGTCGAAACATGGCCTACACTGCGCCTCTTGAACACCGGCGAAGTGTCCCGGCTGAGCTTCTTGCAGATATTGTTGAGCACGCTTAACCATGAAGCAGCTAACCGCACTAAGAAATATGCCACAAGGGAACCAAGCATATCTGGGTTCGGAACAACGTATTCTCTACTTCGGTGCACGCAGGACCTATCATCCCAAGATTGCAGAATTTGTCTTAGTGGTGTGATTGGAGACTTTTCAAATGGTGCTGTTTGGGAAAACAAGGAGGAAGAGTTGTATGAGTTGCAACTTGGAAATGAAAGCCATAATTTAGAGCCTCTACAATTTGGTTTGGCCACTATTGAAGCTGCAACAAATAAGTTTTTTCATGAAAAATGTTTAGGCCAAGGTGGATTTGGACAGGTTTACAAGGGTGTTCTTTCAAATGGTCAAGAATTAGCTGTCAAGAGACTTTCAAAAAATTCTGGTCAAGGTGGAGAAGAATTCAAGAACGAGATTTTATTGATTGCCAAACTTCAGCACATAAACTTGGTGGCCTTGCTTGGATTTTGCATAGAAGAACAAGAGAAAATCCTTGTTTATGAATATGTTCGGAACCTTGACTAA 639 0.4225 MVRYSNHPLLSTVETWPTLRLLNTGEVSRLSFLQILLSTLNHEAANRTKKYATREPSISGFGTTYSLLRCTQDLSSQDCRICLSGVIGDFSNGAVWENKEEELYELQLGNESHNLEPLQFGLATIEAATNKFFHEKCLGQGGFGQVYKGVLSNGQELAVKRLSKNSGQGGEEFKNEILLIAKLQHINLVALLGFCIEEQEKILVYEYVRNLD 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4620g00005 212 Pfam Protein tyrosine and serine/threonine kinase 135 210 IPR001245 GO:0004672|GO:0006468
Pral4620g00005 212 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 96 207 - -
Pral4620g00005 212 ProSiteProfiles Gnk2-homologous domain profile. 9 118 IPR002902 -
Pral4620g00005 212 Gene3D Phosphorylase Kinase; domain 1 107 207 - -
Pral4620g00005 212 SUPERFAMILY Protein kinase-like (PK-like) 115 210 IPR011009 -
Pral4620g00005 212 ProSitePatterns Protein kinases ATP-binding region signature. 138 160 IPR017441 GO:0005524
Pral4620g00005 212 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 94 210 - -
Pral4620g00005 212 Gene3D - 22 103 IPR038408 -
Pral4620g00005 212 ProSiteProfiles Protein kinase domain profile. 132 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4620g00005 Pral-Chr4620 55504 56884 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4620g00005 1 92 Receptor kinase-like Gene Family AT4G11530 27.778 1.80e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4620g00005 PK_Tyr_Ser-Thr 4.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4620g00005 - - mtr:25479483 176.022