Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4620g00004 ATGGAGAAAAGGCAAAGAGATTGTCTCTTATTTGTGGGCTTTCTGTGCCTCATTGCCCTGGCTGAGTCTGCAACTGTAAGAATAATACCAGTAGGAGTGATTCTGGATTCTAGTTCATCACTTGGTCCCACGGTTCTTAATTGCACCAACATCGGACTCCATGGTTTGTATTCCTCAGGGTATTCCTATGGAACAAAGCTCCAACTTCATTTCAAGGATTCCCACGCCGATCTCCTCACTGCAGCGTCCGCAGCTTGGGATCTAATAAATGGAACAAAGGTGCATGCAATCCTGGGACCTGAAAACTATGAGCAAGCAAGCTCCACTAGAAGCCATTGCTTTCAGTTCGTAGCTATCGCAGCCATTATCAGAGCTTATAATTGGCAGTCTGTGGTCGCCATCTATGAAGACCCAGACTTCCGCAATGACCTCATTCCATGTCTCACTTATGCCTTGCAAGAAATGGACACTCTAGTGCCTAACGCAATTGTCATTCGTCGACGTTCCAATGATTCTCAAATCACCGGCGAGCTCGACAAGATAAATCCCGAGCGCGCACATGTGTTTCTTGCTCATATGACTGTGGAGCTTTGGTCAAGACTTGTGAAACATGCAAAAGTTAAATGGATGTTGAGTAGAGGACACCCTTGGATACTTACACAAGGCTTATCCTCAGTGATAGATCCCGAAGCCAAAGATATGAAAGTGAAAGCCTACATGGATGGTGCTTTGGGTGTGAGGCCATCAGTGGCCGTGAGGCGACCACTGAATGTTTCCAGCATTATAGCTCAGCGCTTTTCCTTAGCGAGAACATTAAAGTTTGAGTACAATAAAACTCTCTCTATCTGGCATGTGGGCTTACGACACTATCACAGCATATTGGCCAAAGCGGTAGAGAAGGCCAGCTTAGGCAATTCTACTTTCGGATATGGGAATGAAAGTAGAGTTGATCTTGAAGATAGAGGAATGCGCAACGAAACAGGCCCAAAGCTTCGCAGAAAAATTCTGGCTGCTAATTTCGTAGGCCTTGAAAATGGTGAACCAGCTGGTAAATACAAACTAACGGACCCGATATGGCCGGGTAACACAACAGAGAGACCACCAAAGTTGGAAATTGGGGTCCCAAAGATGTATTTTACTCAATTTGTTGATGTTAATGTGAGTGTAGAAGGGCAGAATGTATCAGCCTCTAGCTTGACTGTTGATGTGTTTAAAAGAGTGGTTCATGTTTTGCCATTTCCTTTACCTTATGAGTTTGTGCCTGTGAGCAATGGAGAGCTGACTCCCTCCAGCTACGATGATCTTCTCTGCCATATCACAGACAAGCTTGGATACACTCAAGAACATCCCAGGATATGCTAA 1362 0.4501 MEKRQRDCLLFVGFLCLIALAESATVRIIPVGVILDSSSSLGPTVLNCTNIGLHGLYSSGYSYGTKLQLHFKDSHADLLTAASAAWDLINGTKVHAILGPENYEQASSTRSHCFQFVAIAAIIRAYNWQSVVAIYEDPDFRNDLIPCLTYALQEMDTLVPNAIVIRRRSNDSQITGELDKINPERAHVFLAHMTVELWSRLVKHAKVKWMLSRGHPWILTQGLSSVIDPEAKDMKVKAYMDGALGVRPSVAVRRPLNVSSIIAQRFSLARTLKFEYNKTLSIWHVGLRHYHSILAKAVEKASLGNSTFGYGNESRVDLEDRGMRNETGPKLRRKILAANFVGLENGEPAGKYKLTDPIWPGNTTERPPKLEIGVPKMYFTQFVDVNVSVEGQNVSASSLTVDVFKRVVHVLPFPLPYEFVPVSNGELTPSSYDDLLCHITDKLGYTQEHPRIC 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4620g00004 453 PANTHER OS06G0188250 PROTEIN 9 344 - -
Pral4620g00004 453 Gene3D - 114 277 - -
Pral4620g00004 453 SUPERFAMILY Periplasmic binding protein-like I 29 356 IPR028082 -
Pral4620g00004 453 Gene3D - 28 112 - -
Pral4620g00004 453 Pfam Receptor family ligand binding region 108 343 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4620g00004 Pral-Chr4620 39278 44432 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4620g00004 11 439 Ion Channels AT2G29120 27.186 3.80e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4620g00004 K05387 - qsu:112025251 235.728