Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral461g00009 ATGGCTCCAAAGCGGCTTCTAGAGGACCCGCCACCTGCTTCTTCCTCGGAAGATGAGGAAGAAACAGAGGACGACGTTGCCGAAGAAGACGAAGAAAATGGTGATTCCGAAGGACTGGAAGACGAAGACGAAGACGAAAACAGCCATCAGAATAAGAAGCCCAAGTCTAATAATACCCCTGTCACCAAATCTCTAAAAGGTACACAAGACCAATCTGCGTCAGATTCCGGCGACGAAGCTGGGTCGGAAACGGAGTCCGACGATTCGCGGCCCTCGCCATCTGCCTCCGCCTTCACCATCAAGCCTATTGCGTCCAAACCAATGAAAGATTCCGTACAGTCCCAGAAAAATTCCGCTAACCGGAAGTTGACCATGTCGCCAACTAAGACTGTCACCGGCGGCGTGAAGCGCTCCCGGGAAAGCGATGATGTTGAAAGGAAAGAGTCAAAGAAGAATAAAGTATCTAATGGTCAGGATGAAGATTTGAAAAGGGGATCAGGTGCTCAACGCCTTTGGAGTGGAGACGACGAGGTTGCGATTTTGGAGGGCATGATCGAGTACCAATCCGAGAAAGGGGCTGACCCGTGGGCTGATATGGAGGCTTTTTATGGATTCGTTAAGGAAAATCTTCACGCCGATGTGTCGAAGGACCAATTAAAGAACAAAATCAAGAGGTTGAAACAGAAATACCAGAGCACTGCAGAAAAGGGTAAAAATGGTGAAGCCCCTGTTCTTGGCAAGCCACATGACTCCAGGCTTTTCGATCTATCGAAGAAAATTTGGGGAGCTTCCGTGACAAATGGGGTGGATGATAGTGCTAAGAAGAAGAGAAAGCCAACTCAGAGCGAACCCAAGACTTCTGCTTCAGCATTACCGAATGGTGAAATTAATGCTGAACTAGCAAGCCCTAATTCGTCATTCTTTGACGCGTTACTGGCAGATGGGATGTCGATACCAGAGGGTGCTGCAAGTGTTATGAAGGAAGCTCTGCCATTGATAGGGAGGGCGAGGACCAGGGAATTGGAAAGCAAGTGGAGGAAGTTGCAGGAAGATGAATTCAAATTGTACTTGAAGAAGGTCGAGTTGGTTCGCGACTCTGCTAAACTGATGTTAGAAGCGATGAAATCATCCATGTCTTAG 1140 0.4816 MAPKRLLEDPPPASSSEDEEETEDDVAEEDEENGDSEGLEDEDEDENSHQNKKPKSNNTPVTKSLKGTQDQSASDSGDEAGSETESDDSRPSPSASAFTIKPIASKPMKDSVQSQKNSANRKLTMSPTKTVTGGVKRSRESDDVERKESKKNKVSNGQDEDLKRGSGAQRLWSGDDEVAILEGMIEYQSEKGADPWADMEAFYGFVKENLHADVSKDQLKNKIKRLKQKYQSTAEKGKNGEAPVLGKPHDSRLFDLSKKIWGASVTNGVDDSAKKKRKPTQSEPKTSASALPNGEINAELASPNSSFFDALLADGMSIPEGAASVMKEALPLIGRARTRELESKWRKLQEDEFKLYLKKVELVRDSAKLMLEAMKSSMS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral461g00009 379 MobiDBLite consensus disorder prediction 53 79 - -
Pral461g00009 379 Coils Coil 209 236 - -
Pral461g00009 379 MobiDBLite consensus disorder prediction 230 249 - -
Pral461g00009 379 MobiDBLite consensus disorder prediction 13 44 - -
Pral461g00009 379 MobiDBLite consensus disorder prediction 108 134 - -
Pral461g00009 379 Pfam Protein of unknown function, DUF573 169 262 IPR007592 GO:0006355
Pral461g00009 379 MobiDBLite consensus disorder prediction 135 166 - -
Pral461g00009 379 MobiDBLite consensus disorder prediction 1 174 - -
Pral461g00009 379 MobiDBLite consensus disorder prediction 268 296 - -
Pral461g00009 379 PANTHER BNAANNG10740D PROTEIN-RELATED 11 373 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral461g00009 Pral-Chr461 23198 24860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral461g00009 7 375 GeBP Transcription Factor Family AT1G61730 29.275 3.73e-26 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pral461g00009 DUF573 1.7e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral461g00009 - - pcin:129314672 553.518