Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4618g00035 ATGGAAACTAGCACCGGACTTTTTGCAGGGTCTCACAACAGCAACGAACTTGTGGTCATACAAGGACATGAAGAAGAGCCTAAGCCTGTGAAGAACTTAGATGGGCAGCTATGTGAGATGTGTGGTGATTCTGTAGGATATACAGTCGACGGAGATTTGTTTGTGGCCTGTGAAGAGTGTGGTTTCCCAGTGTGCAGGCCTTGTTATGAGTATGAAAGGAGGGAAGGAACTCAAGTTTGCCCCCAGTGCCAGACCAGATACAAGCGAATCAAAGGAAGCCCAAGAGTTGAGGGGGATGAAGATGAAGATGACATAGATGATATTGAGCACGAGTTCAAAATGGAAGAAGAAAGGTACAAGCTCATGATAGACCGTGGAGAAGATGACGAGAATGCCAAATTACCAGTAGTAATAGCCGAGGTGAATGGAGAGATTCCTGTTATTGGAGAACCTGGAAATGCAAAGTCGGATGAAAAGACAGAGATAACAAATGAATGGAAGGTGCAACAAGGCAATCTGTGGCCTGAAACTGATGCATCAATTGATCCTGAAAAGGCCATGAGAGACGAAGCTAGACAGCCACTCTCAAGGAAAGTAGCAATACCATCAGGCAGACTCAGCCCTTACAGGATGATGGTCGCAGCTCGGCTTGTGATTCTGCTATTGTTCCTTCAGTACAGAGTCTTACACCCAGTGCCTGACGCAGTTGGACTCTGGCTTGTATCTGTAATATGTGAAATATGGCTTACATTGTCGTGGATAATAGATCAGATTCCGAAATGGTTTCCCATTGGCCGGGAGACATACCTTGATAGGCTTTCACTCAGGTTTGAACCAGAGAACAAGCCGAATTTGTTTCCTCCAATAGATGTCTTGTCATACCGTGGATCCGATTAA 897 0.4537 METSTGLFAGSHNSNELVVIQGHEEEPKPVKNLDGQLCEMCGDSVGYTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCQTRYKRIKGSPRVEGDEDEDDIDDIEHEFKMEEERYKLMIDRGEDDENAKLPVVIAEVNGEIPVIGEPGNAKSDEKTEITNEWKVQQGNLWPETDASIDPEKAMRDEARQPLSRKVAIPSGRLSPYRMMVAARLVILLLFLQYRVLHPVPDAVGLWLVSVICEIWLTLSWIIDQIPKWFPIGRETYLDRLSLRFEPENKPNLFPPIDVLSYRGSD 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4618g00035 298 CDD mRING-HC-C4C4_CesA 36 86 - -
Pral4618g00035 298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 111 IPR013083 -
Pral4618g00035 298 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 192 292 - -
Pral4618g00035 298 SUPERFAMILY RING/U-box 22 108 - -
Pral4618g00035 298 FunFam Cellulose synthase 20 111 - -
Pral4618g00035 298 Pfam Zinc-binding RING-finger 28 104 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4618g00035 Pral-Chr4618 354956 356788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4618g00035 1 292 Cell Wall Biosynthesis AT5G17420 60.681 8.71e-114 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4618g00035 K10999 - gmx:100777270 443.736