Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4618g00027 ATGCTGGAGGAGGAAGTAAGAAGAGAGCTGATGCTGGAGAGAGAACTGGCTTTCCGAAGGAGTTTGGGAGAAAAGTTCTTGCTTGATGAGCAGATGGCAATAGGCTTGAATCCCAGACTCAACGTAATTCCTGCTTATGATACCCGCCCACTTGGGGAACGAATCTCATTTCCGCAAACTGTGCCCCAACTTGCTCAATCTGTGAAACCTGCTGATCCTAAGATTAACATGGAAAAATTGATCATGCTGGCTCAGCCAAGCCCAGAAATGTATAGACAAAAGCGGAAAGCTGTGAAACAAGATGCTGATGATGATGCAGAGCATTGTCCAGTTGTGAACAAAAAACCGAAGGATGACTGGAGCTGTGAACTATGTAGTGTGCGTGTCACAAGTGAGAAAGCTTTCAACGAACACCTTCAAGGTAAAAAGCACAAGGCTAGGGAATCTGCAAAAAAGAGAATGCAGAAGACCGATACGAATGCTGGCTCATCATCAACATCAAAGAACGTCGAACACTCTCCGAAACCTATTGAAACTACTGTGACCGCTACAACTTCAGATTTGGAAGCCGATGTTCAAGCTCAACCTGAAGTGACAAGGGTAGGCAAAGATGTTGTGGAAGTCAAAACCAAAGATGAGGAGGTTGTGGTGAAGATCCAAAGTACACAAGATGCAGAAAAGCAAAAGGGGACTGAGGCAGAGCAGGCAAGGATACCAGACGCAGTGAACAAGAGATACAAGTTTTGGTGTGACCTCTGCCATGTTGGATCTTTCTCTCCTGTGGTGATGGAGAACCACAGGTTGGGAAGAAAGCACACCAACCGATTAAAGAGATTGCAGCGAAACGCTGACAGTGCTCCTTCCACATCTGCAGTTCCAAAAGCTACTCCGTCATTGACAAAAGATGCAGATGGTCGTCCGCATGATGATTGTGTGGTGGTGGAAGGTTTCCTAAACGGTAAATCCTGTCTGGCAGCATAA 981 0.4597 MLEEEVRRELMLERELAFRRSLGEKFLLDEQMAIGLNPRLNVIPAYDTRPLGERISFPQTVPQLAQSVKPADPKINMEKLIMLAQPSPEMYRQKRKAVKQDADDDAEHCPVVNKKPKDDWSCELCSVRVTSEKAFNEHLQGKKHKARESAKKRMQKTDTNAGSSSTSKNVEHSPKPIETTVTATTSDLEADVQAQPEVTRVGKDVVEVKTKDEEVVVKIQSTQDAEKQKGTEAEQARIPDAVNKRYKFWCDLCHVGSFSPVVMENHRLGRKHTNRLKRLQRNADSAPSTSAVPKATPSLTKDADGRPHDDCVVVEGFLNGKSCLAA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4618g00027 326 MobiDBLite consensus disorder prediction 280 296 - -
Pral4618g00027 326 PANTHER OS06G0651300 PROTEIN-RELATED 2 288 - -
Pral4618g00027 326 Gene3D Classic Zinc Finger 222 280 - -
Pral4618g00027 326 Gene3D Classic Zinc Finger 107 161 - -
Pral4618g00027 326 MobiDBLite consensus disorder prediction 136 177 - -
Pral4618g00027 326 SMART ZnF_U1_5 245 279 IPR003604 GO:0003676|GO:0008270
Pral4618g00027 326 SMART ZnF_U1_5 117 151 IPR003604 GO:0003676|GO:0008270
Pral4618g00027 326 MobiDBLite consensus disorder prediction 280 305 - -
Pral4618g00027 326 MobiDBLite consensus disorder prediction 156 177 - -
Pral4618g00027 326 Pfam Zinc-finger of C2H2 type 248 272 - -
Pral4618g00027 326 Pfam Zinc-finger of C2H2 type 120 144 - -
Pral4618g00027 326 SUPERFAMILY beta-beta-alpha zinc fingers 107 154 IPR036236 -
Pral4618g00027 326 ProSitePatterns Zinc finger C2H2 type domain signature. 122 144 IPR013087 -
Pral4618g00027 326 SUPERFAMILY beta-beta-alpha zinc fingers 239 280 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4618g00027 Pral-Chr4618 278866 281177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4618g00027 119 278 C2H2 Transcription Factor Family AT5G61190 26.875 1.28e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4618g00027 - - pcin:129308529 319.316