Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4618g00023 ATGGCATTGAAAAGCCAAGTTCGGCGTCTCTTCTTCTTCTTGTTGTTATTGCTGGGCCAGTACGCCGTTTCTGCTTCCTCCGGTGCTGCTTATCACGACAGCGGTGTTCCCAAAGAGCAAGAGGACGATCGAATCTCCGCCCTCCCCGGACAGCCGGCGGTCCCTTTTTCTCAGTTCTCCGGCTACGTCACCGTCAACGACGAGCATGGCCGAGCACTGTTCTACTGGTTAACGGAGGCTTACACTTCCCCTCACACCAAGCCTCTCGTTCTCTGGCTCAATGGAGGGCCGGGTTGCTCATCAGTAGCATATGGAGCATCAGAGGAAATTGGGCCATTCCGGATAAATAAAACTGGTACTTCGTTGTATCTTAACAAGTATTCATGGAACAGAGAAGCAAATATTCTCTTTCTTGAATCGCCTGCTGGTGTAGGTTTCTCCTACACAAATACAAGCTCTGACCTCAAAACTACTGGGGACGAAAGGACAGCTCAGGATGCTCTAATATTTCTAATCAGATGGATGTCAAGATTCCCTCAATATAAGTACAGAGACTTTTACATCTCTGGAGAGAGTTATGCAGGGCACTACGTTCCCCAGTTGGCTCAAAAAATTTACCATTATAATAAAGCCAATCCCCAGATCATTAATCTCAAGGGTTTCATTGTGGGAAATGCTGTGACGGATAACTACTATGATGGAATTGGAACTGTGACATATTGGTGGAGCCATTGTATGATATCTGATAAATCATACAAAACTCTCCTCAAACACTGCAATTTCACGGCAGAGGAAACATCTAAAATATGTGATGATGCTGTGCGTTATGCAATTAACCATGAATTTGGACGCATTGATCAGTACAATATTTATACCCCAACATGCAGGAGTAACAGTACTGTACAGTACATGAGGCTCAAGAGTACAATACTACATAGGATCTCAGGGTATGACCCATGCACTGAAAATTATGCAGAGAAATACTATAATCTTCCTGAAGTGCAAAAAGCAATGCATGCTAATGTTACAGGCATTCCTTACAAATGGACTGCATGCAGTGATGTGCTCTTAAAATACTGGAAGGACTCTGCAGTTTCTGTATTGCCCATTTACAAAGAGTTAATTGCAGCTGGTTTGAGAATTTGGGTTTTCAGTGGAGATACAGATTCAGTGGTTCCAGTGACAGCCACTAGATTTTCCCTTAACAGTCTCAAGCTCAAGATCAATGCTCGTTGGTGCCCATGGTACTCTGGTGGACAGGTAGGTGGATGGACAGAGGTCTATGATGGACTAACTTTTGCAGCAGTACGAGGAGCAGGGCACGAAGTGCCATTGTTTCAGCCAAAAAGAGCTCTCACTCTGTTCAAGTCATTCTTAGAAGGAAAGAAGCTCCCAACATCTTGA 1404 0.4437 MALKSQVRRLFFFLLLLLGQYAVSASSGAAYHDSGVPKEQEDDRISALPGQPAVPFSQFSGYVTVNDEHGRALFYWLTEAYTSPHTKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTGTSLYLNKYSWNREANILFLESPAGVGFSYTNTSSDLKTTGDERTAQDALIFLIRWMSRFPQYKYRDFYISGESYAGHYVPQLAQKIYHYNKANPQIINLKGFIVGNAVTDNYYDGIGTVTYWWSHCMISDKSYKTLLKHCNFTAEETSKICDDAVRYAINHEFGRIDQYNIYTPTCRSNSTVQYMRLKSTILHRISGYDPCTENYAEKYYNLPEVQKAMHANVTGIPYKWTACSDVLLKYWKDSAVSVLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNSLKLKINARWCPWYSGGQVGGWTEVYDGLTFAAVRGAGHEVPLFQPKRALTLFKSFLEGKKLPTS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4618g00023 467 Gene3D - 367 461 - -
Pral4618g00023 467 Gene3D alpha/beta hydrolase 39 297 IPR029058 -
Pral4618g00023 467 FunFam Carboxypeptidase 316 464 - -
Pral4618g00023 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 448 IPR001563 GO:0004185|GO:0006508
Pral4618g00023 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Pral4618g00023 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Pral4618g00023 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
Pral4618g00023 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Pral4618g00023 467 FunFam Carboxypeptidase 367 461 - -
Pral4618g00023 467 FunFam Carboxypeptidase 39 297 - -
Pral4618g00023 467 ProSitePatterns Serine carboxypeptidases, serine active site. 188 195 IPR018202 GO:0004185
Pral4618g00023 467 Gene3D - 320 357 - -
Pral4618g00023 467 Pfam Serine carboxypeptidase 50 461 IPR001563 GO:0004185|GO:0006508
Pral4618g00023 467 SUPERFAMILY alpha/beta-Hydrolases 39 465 IPR029058 -
Pral4618g00023 467 ProSitePatterns Serine carboxypeptidases, histidine active site. 431 448 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4618g00023 Pral-Chr4618 254493 261173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4618g00023 325 464 Calmodulin-binding Proteins AT2G22960 28.369 2.16e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4618g00023 K16297 - gmx:100785391 766.918