Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4618g00014 ATGTGGTTACAAGACATGGCTGATCAGCTGGGAAATTTTGTGAGGTTGGATGATCTGGACTCTAGGCTCTCTTCATCTTCTGATACTCGAGTTAAGAAAAGTGGATTTAGTATTGAGAAATTAAACCATGGTAGCCATGCAAGCACTGCAACCTCTAGGTCTTTCAAAAGAGGAATGATGAAAGGGTCTGAAGGACTGAAGTCAATTGGACGATCACTTGGATTCGGGGTATCTAAGGCAGTATTCCCTGAAGATCTAAAAGTGTCAGAGAAGAAGATATTTGATCCTCAAGACAAATTTTTACTCCAATTGAACAAACTTTTTGTTGTCTCGTGCATTTTGGCCGTGTCTGTGGATCCATTATTTTTCTATCTCCCTGTCATCGATGATCCATCTAACTGCCTTGGTATAGATCGAAAAATGGCAATCATTGTCACCACCTTGAGGACAGTTATTGATGTTTTCTATCTTATACACATGGCTCTCCAATTCCGCACTGCCTATATTGCCCCATCGTCTCGTGTCTTTGGACGGGGGGAGCTTGTGATAGATTCAACACAGATAGCCACGCGATACTTACGGCGGTATTTCATTGTTGATTTTCTATCTGTGCTGCCCTTACCACAGGTTGTGGTTTGGAGATTTCTTGAAAGATCAAAAGGCTCCGATGTATTAGCAACAAAGCAGGCCTTGCTGTTTATTATCTTACTACAGTATGTTCCTAGGTTTCTTCGGATGTTACCACTGACTTCAGAACTTAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCATGGGAAGGTGCTGCATATTATTTGCTGTTATACATGCTTGCCAGTCATATAGTTGGGGCTTTTTGGTACTTGTTGGCTGTTGAACGCAATGACTCATGCTGGCAGAAGGCATGTACGAATGGGTGCAAAAAGGATTTCTTGTATTGTGGTAACCAGTTTATGGAAGGTTATAATGAGTGGAACAAAACAAGTGATCAAATTCTTAAGGAACATTGCTCTGCCAAAGATGATTCGCCTTTTGATTTTGGAATTTTTAAACAAGCATTGTCATCTGGCATTATTTCATCAAAAAAGTTTGTCTCCAAATACTGTTATTGTTTATGGTGGGGCCTCCAGAATTTGAGTACACTTGGCCAGGGGCTTGAAACCAGCACTTATCCTGGGGAAACCATCTTTTCAATAGCACTAGCCATATTTGGCCTTATCCTCTTTGCACTTCTAATTGGTAACATGCAGACGTATCTTCAATCTATTACCATAAGGCTTGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCATCACCGCTTGCTCCCACCAGAGCTGAGAGAGCGGGTTAGACGCTATGATCAATATAAGTGGTTAGCAACACGTGGTGTGGATGAAGAAAGTTTGGTTCAGACACTTCCAAAGGATCTTAGAAGAGACATCAAGCGTCACCTGTGTCTGGCTTTAGTGAGAAGGGTTCCACTGTTTGAGAGTATGGATGAGAGACTGCTTGATGCCATTTGTGAAAGACTGAAACCTTGTTTATTTACTGAGAATACTTACATTGTACGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATTCGTGGTCGACTCGAAAGTGTTACTACAGATGGTGGTAGAAGCGGATTTTTCAACCGTGGTTTCCTTAAAGAGACTGACTTCTGTGGGGAGGAGCTTTTAACCTGGGCACTGGATCCTAGATCTGGTTCTAATCTCCCAACTTCTACTCGAACAGTTAAGGCATTAACAGAGGTTGAATGTTTCGCCTTGATCGCAGATGAGTTAAAATTCGTTGCTAGTCAGTTTAGGCGCCTTCATAGTAGACAGGTTCAACACACATTCCGGTTCTACTCACAGCAATGGAGGACATGGGCTGCCTGCTTTATTCAAGCAGCATGGCGGCGATATTCTAAAAGGAAGGCCATGGAGCTTCGTCGAAAGGAAGAACCTGAGGAGTCAGAAGGAACTCAAAGTAATGTTAGTGGCAGTTCATACAGCATTGGTGCTACCTTCTTAGCTTCAAGGTTTGCAGCCAATGCTCTTCGGGGCATACATCGCAATCGGAATGCTAAGACTGCGAGGGAGTTGGTGAAACTACAAAAACCTCCAGAACCTGACTTTACTGCTGATGATGCAGATTAA 2178 0.4275 MWLQDMADQLGNFVRLDDLDSRLSSSSDTRVKKSGFSIEKLNHGSHASTATSRSFKRGMMKGSEGLKSIGRSLGFGVSKAVFPEDLKVSEKKIFDPQDKFLLQLNKLFVVSCILAVSVDPLFFYLPVIDDPSNCLGIDRKMAIIVTTLRTVIDVFYLIHMALQFRTAYIAPSSRVFGRGELVIDSTQIATRYLRRYFIVDFLSVLPLPQVVVWRFLERSKGSDVLATKQALLFIILLQYVPRFLRMLPLTSELKRTAGVFAETAWEGAAYYLLLYMLASHIVGAFWYLLAVERNDSCWQKACTNGCKKDFLYCGNQFMEGYNEWNKTSDQILKEHCSAKDDSPFDFGIFKQALSSGIISSKKFVSKYCYCLWWGLQNLSTLGQGLETSTYPGETIFSIALAIFGLILFALLIGNMQTYLQSITIRLEEMRVKRRDSEQWMHHRLLPPELRERVRRYDQYKWLATRGVDEESLVQTLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKETDFCGEELLTWALDPRSGSNLPTSTRTVKALTEVECFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKAMELRRKEEPEESEGTQSNVSGSSYSIGATFLASRFAANALRGIHRNRNAKTARELVKLQKPPEPDFTADDAD 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4618g00014 725 Gene3D Jelly Rolls 496 616 IPR014710 -
Pral4618g00014 725 Gene3D - 106 423 - -
Pral4618g00014 725 PRINTS EAG/ELK/ERG potassium channel family signature 149 159 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4618g00014 725 PRINTS EAG/ELK/ERG potassium channel family signature 461 468 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4618g00014 725 PRINTS EAG/ELK/ERG potassium channel family signature 160 169 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4618g00014 725 PRINTS EAG/ELK/ERG potassium channel family signature 393 404 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4618g00014 725 PRINTS EAG/ELK/ERG potassium channel family signature 277 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4618g00014 725 PRINTS EAG/ELK/ERG potassium channel family signature 367 384 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4618g00014 725 PRINTS EAG/ELK/ERG potassium channel family signature 411 420 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4618g00014 725 Gene3D Helix hairpin bin 426 489 - -
Pral4618g00014 725 SUPERFAMILY cAMP-binding domain-like 427 617 IPR018490 -
Pral4618g00014 725 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 85 719 - -
Pral4618g00014 725 Pfam Ion transport protein 105 424 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral4618g00014 725 SUPERFAMILY Voltage-gated potassium channels 96 420 - -
Pral4618g00014 725 CDD CAP_ED 498 629 IPR000595 -
Pral4618g00014 725 MobiDBLite consensus disorder prediction 705 725 - -
Pral4618g00014 725 Pfam Cyclic nucleotide-binding domain 519 608 IPR000595 -
Pral4618g00014 725 ProSiteProfiles IQ motif profile. 634 663 IPR000048 GO:0005515
Pral4618g00014 725 FunFam Cyclic nucleotide-gated ion channel 1 425 489 - -
Pral4618g00014 725 ProSiteProfiles cAMP/cGMP binding motif profile. 498 582 IPR000595 -
Pral4618g00014 725 SMART cnmp_10 498 629 IPR000595 -
Pral4618g00014 725 FunFam Cyclic nucleotide-gated ion channel 1 496 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4618g00014 Pral-Chr4618 121378 131177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4618g00014 6 722 Ion Channels AT5G57940 77.978 0.0 1141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4618g00014 K05391 - gmx:100820202 1207.59