Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4618g00007 ATGGCTGACCGTGAGAGCTCCGGAGCTCTCATAGACGGTAACTCTGAACTGCCCGAAGAAAACGAATCAGCAGAAGAAGAAGAAAAAGAAGGAAAGAGAGAGGAACTAAATCGAGTCTCTGAAGCACAGCCTGGCGAGTCTCAGCAAGGCGACTTGCAGAATTCTGAACTTTCCCGGCAAGCAGAGCCACCGGGGCCTGATTCGGAAACCCTAGCTGTGCCCACTTCGCTTGAGCTGGAAGAAAAAGATCAGAATGCCGATACCTCTACTACGCAGGAGGCTGTGAAAGGCCAAAATAAGCCAGTTGGACCTTCTGACAAGGAACTTACTGAAAGAAAATCAGTCCAGACAACTCAAACACAGATAGAAAATCAACCTCAGGTGTCGGTGTGTTCAAGTGCATTGTCTGAACTGTCACCAACATCCGTAACACAATCTTTATCATCTGCTCCTAGTCCAGCTTTACCAGAACAAAGACAATCTTCTCCAAATGTTAATAATGCAAATATGCTGGAAGTATACAAGAAAAAGCCTTCTCGCCGCAATACCTTGTCTCCTGTTTCTGTTGTGAGGGCATCCTCATCTGATGGATACAATTGGCGGAAGTATGGCCAGAAGCAAGTTAAAAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGAATGTTGTGCTAAGAAGATTGAGTGCTGTGACCATTCAGGCCATGTTTTAGAGGTTGTATATAAAAGTCAACACAGCCATGATCCACCACGGAAGACTAACCCCAGTAGAGAAAGTAAGTTTGCATCATCCAAACAGCCTAATGTGGAGAACATTGTTCTAGAGAAGCCCATCAGAGTGCTGAATGATCCAAATCCGTGCCCTTCTTCAAAGGAACCTCCACAAGAAGCACCATGCAGTGCTGATAGGAAAAGACTAAACTCATGTGATCAAAGTGATAATGGTAAAGTTGTCTTGAAGGATGAGCATGTTATTGAGACAGAGCCCAAAAAAAGAGTGAAGAAAGGTGACGGTACATGCCTGGATTCTCCAGTAAAACCTGGAAAGAAACAGAAGTTTGTCGTACATGCAGCAGGAGATGTGGGGATATCGGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGGAACCCTCATCCTAGAAACTACTACAGATGCACTTCAGCAGGATGTCCTGTGCGTAAGCACATTGAGACTGCTGTCGATAACTCTAATGCTGTAATCATTACATACAAGGGAGTTCATGACCATGACATGCCGGTGCCTAAGAAACGGCATGGCCCACTAAGTGCTCCTCTTGTGGCTGCAGCAGCACCTGTTTCAATGAACAATTCACAGCAATTCAAGAAAACAGACAAACTGCAGAAGCAAAAATCTTCCACGCAGTGGTCGGTGGACACCGAAGGCGAATTAACCGGGGAAGCCTTGGAACTCGGGGGTGAGAAAGCAATGGAATCGGCTCGAACTCTCTTGAGCATTGGTTTTGAAATAAAGCCTTGCTAA 1524 0.4567 MADRESSGALIDGNSELPEENESAEEEEKEGKREELNRVSEAQPGESQQGDLQNSELSRQAEPPGPDSETLAVPTSLELEEKDQNADTSTTQEAVKGQNKPVGPSDKELTERKSVQTTQTQIENQPQVSVCSSALSELSPTSVTQSLSSAPSPALPEQRQSSPNVNNANMLEVYKKKPSRRNTLSPVSVVRASSSDGYNWRKYGQKQVKSPTGSRSYYRCTHSECCAKKIECCDHSGHVLEVVYKSQHSHDPPRKTNPSRESKFASSKQPNVENIVLEKPIRVLNDPNPCPSSKEPPQEAPCSADRKRLNSCDQSDNGKVVLKDEHVIETEPKKRVKKGDGTCLDSPVKPGKKQKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPLSAPLVAAAAPVSMNNSQQFKKTDKLQKQKSSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4618g00007 507 FunFam WRKY transcription factor 352 428 - -
Pral4618g00007 507 ProSiteProfiles WRKY domain profile. 362 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4618g00007 507 SMART WRKY_cls 367 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4618g00007 507 SMART WRKY_cls 194 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4618g00007 507 MobiDBLite consensus disorder prediction 1 169 - -
Pral4618g00007 507 MobiDBLite consensus disorder prediction 26 40 - -
Pral4618g00007 507 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 144 456 IPR044810 GO:0003700
Pral4618g00007 507 Pfam WRKY DNA -binding domain 196 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4618g00007 507 Pfam WRKY DNA -binding domain 369 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4618g00007 507 Gene3D WRKY domain 185 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4618g00007 507 Gene3D WRKY domain 352 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4618g00007 507 MobiDBLite consensus disorder prediction 245 316 - -
Pral4618g00007 507 SUPERFAMILY WRKY DNA-binding domain 363 427 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4618g00007 507 MobiDBLite consensus disorder prediction 41 61 - -
Pral4618g00007 507 SUPERFAMILY WRKY DNA-binding domain 193 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4618g00007 507 MobiDBLite consensus disorder prediction 114 169 - -
Pral4618g00007 507 MobiDBLite consensus disorder prediction 452 472 - -
Pral4618g00007 507 ProSiteProfiles WRKY domain profile. 195 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4618g00007 507 MobiDBLite consensus disorder prediction 259 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4618g00007 Pral-Chr4618 83524 89874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4618g00007 121 507 WRKY Transcription Factor Family AT4G30935 55.416 6.62e-131 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4618g00007 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4618g00007 - - gmx:100127377 609.372