Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4618g00006 ATGGCTGACCGTGAGAGCTCCGGAGCTCTCATAGACGGTAACTCTGAACTGCCCGAAGAAAACGAATCAGCAGAAGAAGAAGAAAAAGAAGGAAAGAGAGAGGAACTAAATCGAGTCTCTGAAGCACAGCCTGGCGAGTCTCAGCAAGGCGACTTGCAGAATTCTGAACTTTCCCGGCAAGCAGAGCCACCGGGGCCTGATTCGGAAACCCTAGCTGTGCCCACTTCGCTTGAGCTGGAAGAAAAAGATCAGAATGCCGATACCTCTACTACGCAGGAGGCTGTGAAAGGCCAAAATAAGGAGCCAGTTGGACCTTCTGACAAGGAACTTACTGAAAGAAAATCAGTCCAGACAACTCAAACACAGATAGAAAATCAACCTCAGGTGTCGGTGTGTTCAAGTGCATTGTCTGAACTGTCACCAACATCCGTAACACAATCTTTATCATCTGCTCCTAGTCCAGCTTTACCAGAACAAAGACAATCTTCTCCAAATGTTAATAATGCAAATATGCTGGAAGTATACAAGAAAAAGCCTTCTCGCCGCAATACCTTGTCTCCTGTTTCTGTTGTGAGGGCATCCTCATCTGATGGATACAATTGGCGGAAGTATGGCCAGAAGCAAGTTAAAAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGAATGTTGTGCTAAGAAGATTGAGTGCTGTGACCATTCAGGCCATGTTTTAGAGGTTGTATATAAAAGTCAACACAGCCATGATCCACCACGGAAGACTAACCCCAGTAGAGAAAGTAAGTTTGCATCATCCAAACAGCCTAATGTGGAGAACATTGTTCTAGAGAAGCCCATCAGAGTGCTGAATGATCCAAATCCGTGCCCTTCTTCAAAGGAACCTCCACAAGAAGCACCATGCAGTGCTGATAGGAAAAGACTAAACTCATGTGATCAAAGTGATAATGGTAAAGTTGTCTTGAAGGATGAGCATGTTATTGAGACAGAGCCCAAAAAAAGAGTGAAGAAAGGTGACGGTACATGCCTGGATTCTCCAGTAAAACCTGGAAAGAAACAGAAGTTTGTCGTACATGCAGCAGGAGATGTGGGGATATCGGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGGAACCCTCATCCTAGAAACTACTACAGATGCACTTCAGCAGGATGTCCTGTGCGTAAGCACATTGAGACTGCTGTCGATAACTCTAATGCTGTAATCATTACATACAAGGGAGTTCATGACCATGACATGCCGGTGCCTAAGAAACGGCATGGCCCACTAAGTGCTCCTCTTGTGGCTGCAGCAGCACCTGTTTCAATGAACAATTCACAGCAATTCAAGAAAACAGACAAACTGCAGAAGCAAAAATCTTCCACGCAGTGGTCGGTGGACACCGAAGGCGAATTAACCGGGGAAGCCTTGGAACTCGGGGGTGAGAAAGCAATGGAATCGGCTCGAACTCTCTTGAGCATTGGTTTTGAAATAAAGCCTTGCTAA 1527 0.4571 MADRESSGALIDGNSELPEENESAEEEEKEGKREELNRVSEAQPGESQQGDLQNSELSRQAEPPGPDSETLAVPTSLELEEKDQNADTSTTQEAVKGQNKEPVGPSDKELTERKSVQTTQTQIENQPQVSVCSSALSELSPTSVTQSLSSAPSPALPEQRQSSPNVNNANMLEVYKKKPSRRNTLSPVSVVRASSSDGYNWRKYGQKQVKSPTGSRSYYRCTHSECCAKKIECCDHSGHVLEVVYKSQHSHDPPRKTNPSRESKFASSKQPNVENIVLEKPIRVLNDPNPCPSSKEPPQEAPCSADRKRLNSCDQSDNGKVVLKDEHVIETEPKKRVKKGDGTCLDSPVKPGKKQKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPLSAPLVAAAAPVSMNNSQQFKKTDKLQKQKSSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4618g00006 508 MobiDBLite consensus disorder prediction 1 170 - -
Pral4618g00006 508 SUPERFAMILY WRKY DNA-binding domain 364 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4618g00006 508 SMART WRKY_cls 368 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4618g00006 508 SMART WRKY_cls 195 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4618g00006 508 ProSiteProfiles WRKY domain profile. 196 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4618g00006 508 MobiDBLite consensus disorder prediction 453 473 - -
Pral4618g00006 508 SUPERFAMILY WRKY DNA-binding domain 194 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4618g00006 508 MobiDBLite consensus disorder prediction 246 317 - -
Pral4618g00006 508 MobiDBLite consensus disorder prediction 26 40 - -
Pral4618g00006 508 Gene3D WRKY domain 353 429 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4618g00006 508 Gene3D WRKY domain 186 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4618g00006 508 FunFam WRKY transcription factor 353 429 - -
Pral4618g00006 508 Pfam WRKY DNA -binding domain 370 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4618g00006 508 Pfam WRKY DNA -binding domain 197 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4618g00006 508 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 47 230 IPR044810 GO:0003700
Pral4618g00006 508 MobiDBLite consensus disorder prediction 115 170 - -
Pral4618g00006 508 MobiDBLite consensus disorder prediction 41 61 - -
Pral4618g00006 508 MobiDBLite consensus disorder prediction 260 274 - -
Pral4618g00006 508 ProSiteProfiles WRKY domain profile. 363 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4618g00006 Pral-Chr4618 83524 89874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4618g00006 122 508 WRKY Transcription Factor Family AT4G30935 55.416 5.88e-131 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4618g00006 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4618g00006 - - gmx:100127377 615.535