Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4618g00005 ATGGGTTTGGGAGTATTTTGTTCTATTTTGGTTCTCACGCTTCTCTTCAAGCATTTGGCATGCCAGCAACCAAATACAGATGGATTTTTTGTGTCTGAATTCTTGAAGAAGACTGGTTCATCTTCAACTTTTTCCAAATCCTACAACTTCTCTGGTTCTTCTTTCTGTTCATGGCAGGGGGTTCTCTGTGATGCTCAAAAAGAACAAATCGTTGAGTTCAAAGCCTCTGGGTTAGGCCTCTCTGGGCCCATTCCGGATAATACCATTGGCAAGCTCAACAAGCTTCAATCTTTGGATCTTAGCAGCAACAAAATCACTGGCTTGTCTTCAGATTTCTGGAGTTTAACTTCTCTCAAGAGCCTTAACGTTTCTTCCAACCAGATTTCTGGCTCATTGTCAAACAACATTGGCAATTTTGGTTCCTTGGAAACCTTAGACTTGTCGAACAACAATCTCTCTGAAGAAATTCCAGAAGCTATAGGCTCCCTTGTCAGTCTTCGCGTCCTCAACCTTAGCCGGAACGGGTTCGAACACACCATACCTTCGGGGATTTTAAAGTGTCTGTCTCTGGTCTCAGTTGATCTTTCATCAAATCGTCTGAATGGGACTCTTCCAAAGGGTTTTGGTGCTTCTTTTCCAAAGCTTCAAATGTTGAACCTTGCAGGGAATAGTATTCATGGTCGAGATTTTAACTTTTCTGGATTAGATTCTATTACTACTCTCAATATGTCTGGAAATTTGTTTCAGGGTTCAGTTATGGGTGCATTTCAGGGAAGCTTGGAGGTCATTGATCTGAGCAGGAACCAATTTCAGGGTCACGTTTCTCAAGTACAGTTCAGTTCTAACTTAAACTGGTCTCGTTTAGTTTATTTGGATTTGTCTGAGAATCAGTTTAGTGGTGAAATTTTCCATAATTTGAATGAAGCCCAGAATCTGAAACACCTAAATCTTGCGCACAATAGATTTACCAGGCAGAAATTCCCACAGATTAAGATGCTCCCTGTGTTAGAATACTTGAACTTGTCTAGAACTAGTCTTGTTGCCATTCCTTATGAAATCTCACAACTGAAGCATCTGAATGCTCTGGATATTTCTATGAACCATCTCATCGGGAAAATCCCCTCGCTAAGCAACAAAAACCTCCTAATTCTTGACCTTTCTATCAACAATTTGAGTGGTGAAATACCCCAATCTCTCTTAGACAAGCTCCCAGGAATGGCGAAGTACAACTTCTCGTACAACAACTTCACCTTGTGTGATTCAAAATTTACCCCTGAAATCCTCAAGACGGCATTCTATGGATCAGTTAACAGTTGTCCAATTGCTGTAAACCCCCGAGCTTTAAGAAAAAGAGCCTCTGATCGAAATGGAATGAAGCTGGCTCTCGGATTAACTCTAGCAATCATCTGCCTTCTTGCTGGGCTTTTATTTCTAGCATTTGGCTGCCGAAGGACGACAAAAATGTGGGCAGTGAAGCAAGCTTCATACAAAGAAGAACAAAACATATCAGGACCCTTTGAATTTCAGACTGATTCAACAACCTGGGTGGCCGATGTCAAGCGCAACTTGGTCCCAGTAGTAATTTTTGAGAAGCCATTGTTGAACATCACATTTGCAGACCTCTTGTCTGCAACTTCAAACTTTGATCGAGGTACCCTTTTGGCTGAAGGGAAGTTTGGACCTGTTTATAGAGGCTTTTTACCTGGCGGGATTCATGTAGCTGTTAAGGTTCTGGTTGTTGGCTCTACATTGACAGATCAAGAAGCTGCAAGGGAGCTTGAGTATCTTGGTCGCATCAAGCATCCCAATCTTGTTCCTTTAACTGGGTATTGTCTAGCTGGAGATCAGAGAATTGCTATATATGAATACATGGAGAATGGGAACCTGCAAAACTTGCTCCATGACTTGCCACTTGGAGTGCATAGTCCTGAAGATTGGAGCACAGACACATGGGAGGAAGACGACAATGGTGGTGGGATTCAGAACTCCGGCTCTGAGGGATTACTCACGTCTTGGAGATTTCGTCACAAGATTGCCCTCGGCAGCCGAGCACTGGCCTTTCTTCACCATGGCTGCTCGCCTCCAATCATTCACAGAGATGTCAAGGCCAGCAGTGTTTATCTGGACTACAACCTAGAGCCAAGGTTGTCTGATTTTGGTCTAGCTAAGGTTTTTGGAGATGGCTTGAACGAGGAAATTGCACGTGGCTCACCTGGTTATGTTCCACCAGAGTTTTCCCAACCTGAACAGAACTCCCCAACACAGAAATCTGATGTTTACTGTTTTGGGGTTGTCTTGTTTGAGCTGATAACCGGTAAGAAACCTGTTGGGGATGATTATCAAGATGAAAAGGGAGAAACTTTGGTTAGTTGGGTCAGGGGACTGGTGAGAAAGAACGAAGCTTCAAGAGCCATTGATCAGAAAATTCGCAACACGGGTTCAGAAGAACAAATGGAGGAGGCCATCAAGATTGGTTATCTTTGCACAGCTGATCTTCCATTGAAGAGACCAAGCATGCAGCAGGTAGTTGGGCTGCTTAAAGATATTGAGCCTTCTGCTACTTAA 2565 0.4316 MGLGVFCSILVLTLLFKHLACQQPNTDGFFVSEFLKKTGSSSTFSKSYNFSGSSFCSWQGVLCDAQKEQIVEFKASGLGLSGPIPDNTIGKLNKLQSLDLSSNKITGLSSDFWSLTSLKSLNVSSNQISGSLSNNIGNFGSLETLDLSNNNLSEEIPEAIGSLVSLRVLNLSRNGFEHTIPSGILKCLSLVSVDLSSNRLNGTLPKGFGASFPKLQMLNLAGNSIHGRDFNFSGLDSITTLNMSGNLFQGSVMGAFQGSLEVIDLSRNQFQGHVSQVQFSSNLNWSRLVYLDLSENQFSGEIFHNLNEAQNLKHLNLAHNRFTRQKFPQIKMLPVLEYLNLSRTSLVGXIPYEISQLKHLNALDISMNHLIGKIPSLSNKNLLILDLSINNLSGEIPQSLLDKLPGMAKYNFSYNNFTLCDSKFTPEILKTAFYGSVNSCPIAVNPRALRKRASDRNGMKLALGLTLAIICLLAGLLFLAFGCRRTTKMWAVKQASYKEEQNISGPFEFQTDSTTWVADVKQXNLVPVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDQEAARELEYLGRIKHPNLVPLTGYCLAGDQRIAIYEYMENGNLQNLLHDLPLGVHSPEDWSTDTWEEDDNGGGIQNSGSEGLLTSWRFRHKIALGTXRALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKVFGDGLNEEIARGSPGYVPPEFSQPEQNSPTQKSDVYCFGVVLFELITGKKPVGDDYQDEKGETLVSWVRGLVRKNEASRAIDQKIRNTGSEEQMEEAIKIGYLCTADLPLKRPSMQQVVGLLKDIEPSAT 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4618g00005 857 ProSiteProfiles Leucine-rich repeat profile. 141 163 IPR001611 GO:0005515
Pral4618g00005 857 PRINTS Leucine-rich repeat signature 139 152 - -
Pral4618g00005 857 PRINTS Leucine-rich repeat signature 95 108 - -
Pral4618g00005 857 Gene3D Phosphorylase Kinase; domain 1 510 625 - -
Pral4618g00005 857 Gene3D Ribonuclease Inhibitor 30 178 IPR032675 -
Pral4618g00005 857 Gene3D Transferase(Phosphotransferase) domain 1 626 857 - -
Pral4618g00005 857 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 109 204 - -
Pral4618g00005 857 Gene3D Ribonuclease Inhibitor 280 432 IPR032675 -
Pral4618g00005 857 ProSiteProfiles Protein kinase domain profile. 550 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4618g00005 857 SMART LRR_typ_2 115 138 IPR003591 -
Pral4618g00005 857 SMART LRR_typ_2 92 114 IPR003591 -
Pral4618g00005 857 SMART LRR_typ_2 163 187 IPR003591 -
Pral4618g00005 857 SMART LRR_typ_2 235 258 IPR003591 -
Pral4618g00005 857 SMART LRR_typ_2 333 357 IPR003591 -
Pral4618g00005 857 SMART LRR_typ_2 139 162 IPR003591 -
Pral4618g00005 857 ProSiteProfiles Leucine-rich repeat profile. 94 115 IPR001611 GO:0005515
Pral4618g00005 857 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 235 852 - -
Pral4618g00005 857 FunFam Putative LRR receptor-like serine/threonine-protein kinase 511 625 - -
Pral4618g00005 857 Pfam Leucine Rich repeats (2 copies) 141 174 IPR025875 -
Pral4618g00005 857 Gene3D Ribonuclease Inhibitor 179 279 IPR032675 -
Pral4618g00005 857 Pfam Leucine rich repeat 189 247 IPR001611 GO:0005515
Pral4618g00005 857 Pfam Leucine rich repeat 84 128 IPR001611 GO:0005515
Pral4618g00005 857 SUPERFAMILY L domain-like 53 421 - -
Pral4618g00005 857 MobiDBLite consensus disorder prediction 646 666 - -
Pral4618g00005 857 FunFam Calmodulin-binding receptor kinase CaMRLK 258 377 - -
Pral4618g00005 857 Pfam Protein tyrosine and serine/threonine kinase 554 847 IPR001245 GO:0004672|GO:0006468
Pral4618g00005 857 SUPERFAMILY Protein kinase-like (PK-like) 526 849 IPR011009 -
Pral4618g00005 857 SMART serkin_6 550 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4618g00005 Pral-Chr4618 72568 75883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4618g00005 70 852 Receptor kinase-like Gene Family AT5G07280 32.422 6.08e-109 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Pral4618g00005 PK_Tyr_Ser-Thr 3.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4618g00005 - - gmx:100797738 1274.23