Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4618g00001 ATGACTTTGCTGCGCAAATTGTTCTTTCGTAAGCCCCCCGATGGGCTTCTTGAGATCTGTGAGAGAGTTTATGTTTTCGACTGCTGCTTCATGACGGATGCTTGGAATGAAGAAAACTATAAAGTCTACATGGACGGAATTGTTGCTCAACTTCGAGAGCACTTTCCTGATGCTTCGATCTTGGTCTTCAATTTCCGCCAGGAAGAAACGAAGAGTCAGATGGCTAACATCTTGTCAGATTATGATATGACTATAATGGACTACCCTCGGCAATATGAGGGCTGCCCAGTGCTCAAGATGGAGGTCATCCACCACTTTTTACGGTCGAGTGAAAGTTGGCTCTCGCTTGGGCAGCATAATGTTCTGTTGATGCACTGTGAACGTGGTGGCTGGCCGGTTTTGGCTTTCATGCTGGCTGCGCTTTTGATTTATCGAAAGCAATACAGCGGAGAACAGAGAACTTTGGATATGGTTTACAGGCAGGCTCCACGTGAGCTTTTGCAGTTTTTGTCACCGTTAAATCCGATTCCTTCCCAGCTGCGGTATCTGCAGTATATTTCCAGGAGGAATGTGGCCATAGATTGGCCGCCATTGGACAGGGCGCTTACGTTGGACTGCATCATTCTCAGATGTTTCCCGAACTTTGATGGGGAAGGTGGATGCTGTCCTGTATTTCGAATTTATGGACAAGATCCTTTTCTTGCAGATAAAACTCCAAAAATCTTGTATTCAACACAGAAGAAAAATAAAACCATCCGGTTTTACAAGCAGGGAGAGTGTGAACTAATTAAAATTGACATCAACTGTCATATCCAAGGTGATGTTGTGATTGAATGCATCAACTTGACCAGTGATATGGACCACGAACGGATGATGTTCCGAGTCATGTTCAACACAGCTTTTATTAGGTCCAACATATTGATGCTTAACCGGGATGAAGTTGATATTTTATGGGATGCTAAGGATGACTTCCCCAAGGATTTCAGAGCGGAGATCCTTTTCTCAGAGATGGATGCTGCTGCTGCTGTTATTGCGGATGGTACCTCATGCTTTGAGGAGAAGGAGGGACTGCCAGTGGAAGCATTTGCCAAGGTTCAGGAGATCTTTAACCATGTGGACTGGTTGAATCCTAAGGCTGATGTTGCGCTAAATGTACTCCAACAAATTAGTGCTTCGGTGCATGACCAGATAGATAGAATTTCTACTCAGCAGCATGATACTGGATCTTTGTTGCATGAAAAAGATTCTAGAGTGCCTCAGGGAAAAAAGAATGAAGCAAAAAGGTTATTGTCATCAGATAATGAATCCTCAGAGTTTGGTAAACCTGTGACAAGTTCTACAAAGTTTGATGTAGAAGCACAAGTGGATGATCTTGCCATGTCTAGCTCTGTAGACATTTCTAGTGAATCACTTTCACCAAACACACCTCCACAGAATCCTTCCTTGCTTAGAAAATCTAATACTCCACCCAACACACAACTACCTTCTTATCTTTCCCCTCTAGGACCAGCTTATCCTGTTACTGGCGAATTTGAAGTCCAATCAAAAGACAGAAGTGAGTCATCAATCTTTAGTTCAACATCTGGAACATCATTATCAAGTGCCTTTCCAAATAAGTTGCCTCTTGACGCTGCTTCCCATTTTTCAGCTTCATCTATGACTTCAACTCAGCCATCTCCTTCCCCTACAACCCCTATGAAGGAGATTCTACCTGTTAGAACTAGACCTGCTTCATCCACTTCACAACCTCCAACACCACCCACACCCACGACTCCTCCTCAAAAGGAGCATAAACTGGTTAGAGCTGTACCTCCCCCGCCGCCGCCACCTCCACCTCCACAGAAAAAGCAATCACCGGTTAGAGTCATGCCTCCTCCACCCCCACCAATGGAAGAACCACATTTTCGACCCCCTCCTCCCCAACGGCCTCCTCTAAAGGAGGAGCCTAACGTTAAAACTGGACCACCACCCCCTCCACCACCTCCTTTGAAGTTGCAGCCACCTGTTAGGGCTAAAACTCCTCCTCCTCCTCCTCCACGTCTTCCTAGGAAAGCTGATTCTACCACCGTACCACCACCACCACCACCTCCTCCTCCCCCTGCTGCAGAACTCTCCTCCAAGAACCCTAATCCTTTGTTGCAGAATTCTACATCTGTTCCTGCTGCTCCTAATGCTCCTCCACCTCCTGTTCCCATTAGTAAAGGAGATCTAAAATCAGATGGAAATATTGCATCTAGTACGACAGGACCCCGAGGACGAATTCTATCTCGTACAATAAGTAGTACCAAAAATCAAAATAAAAAGCTGAAGCCGTTGCATTGGCTGAAAATATCTAGAGCAGTGCAAGGAAGTTTGTGGCATGAGGCAGCGAAATCTGGTGAAGCTTCCAAAGCCCCAGAGATTGATATTTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCAAGTTCAGGCGCTGCCAAGAAAGTAGGTGGCAGAAGCTCAGCTGGGCCTAAATCTGATAAAGTGCAACTGGTTGAGCACAGAAGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTGCAAGATTTGATGAGCTCAGTGCTAGCACTAGAGGACTCAGCACTAGACATTGATCAGGTTGAAAACCTTATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTCAAGGGTTATACTGGAGAAAAGGAGAAGTTAGGGAGGTGTGAACAGTTCTTCCTAGAGTTGATGAAAGTACCCAGGGTAGAGTCCAAACTCAGAGTGTTTTCATTCAAGATTCATTTCCAATCTCAGGTTTCTGACCTTAGAAAAAGCCTGAATATTGTAGATGCTACTGTAGAAGAGATTAGGAATTCTTTCAAATTGAAGAGAATTATGCAAACGATACTTTCTTTGGGAAATGCTTTGAACCAAGGAACTGCTAGAGGTTCTGCTATTGGATTCAGATTGGACAGCCTTCTTAAACTCACTGAGACACGAGCACGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGTTGGCTGACAAATTACCTGAAGTTCTAGACTTCTCCAAGGATCTTTCTAACCTAGAGCCTGCAGCAAAGATCCAATTGAAGTTTTTGGCAGAGGAGATGCAAGCTGTAAGCAAAGGATTAGAGAAAGTTATCCAGGAACTCTCAACCTCTGAAAATGATGGTCCTATATCTGAGACATTCCGCAAGACTTTGAAAGACTTCCTCCGTTCTGCTGAAGCTGAAGTTCGATCACTGGCTTCATTATATTCTGGCGTGGGTAGGAAAGTGGACGCGTTGATTGTTTATTTTGGTGAAGATCCATCTCGCTGCCCTTTTGAGCAAGTTGTGTCAACCTTGCTCAACTTCACGAGGATGTTTTACAAAGCCCATGAAGAAAACTGCAAGCAGCTTGAGCTTGAAATGAAGAAATCATCTGATGGTGAGAAAAAGATATGTGAATCACAAAGGATACTGCCTACAGCAATCCGGACCGGCAACGTCAAGTGA 3525 0.444 MTLLRKLFFRKPPDGLLEICERVYVFDCCFMTDAWNEENYKVYMDGIVAQLREHFPDASILVFNFRQEETKSQMANILSDYDMTIMDYPRQYEGCPVLKMEVIHHFLRSSESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKQYSGEQRTLDMVYRQAPRELLQFLSPLNPIPSQLRYLQYISRRNVAIDWPPLDRALTLDCIILRCFPNFDGEGGCCPVFRIYGQDPFLADKTPKILYSTQKKNKTIRFYKQGECELIKIDINCHIQGDVVIECINLTSDMDHERMMFRVMFNTAFIRSNILMLNRDEVDILWDAKDDFPKDFRAEILFSEMDAAAAVIADGTSCFEEKEGLPVEAFAKVQEIFNHVDWLNPKADVALNVLQQISASVHDQIDRISTQQHDTGSLLHEKDSRVPQGKKNEAKRLLSSDNESSEFGKPVTSSTKFDVEAQVDDLAMSSSVDISSESLSPNTPPQNPSLLRKSNTPPNTQLPSYLSPLGPAYPVTGEFEVQSKDRSESSIFSSTSGTSLSSAFPNKLPLDAASHFSASSMTSTQPSPSPTTPMKEILPVRTRPASSTSQPPTPPTPTTPPQKEHKLVRAVPPPPPPPPPPQKKQSPVRVMPPPPPPMEEPHFRPPPPQRPPLKEEPNVKTGPPPPPPPPLKLQPPVRAKTPPPPPPRLPRKADSTTVPPPPPPPPPPAAELSSKNPNPLLQNSTSVPAAPNAPPPPVPISKGDLKSDGNIASSTTGPRGRILSRTISSTKNQNKKLKPLHWLKISRAVQGSLWHEAAKSGEASKAPEIDISELESLFSAAVPSSGAAKKVGGRSSAGPKSDKVQLVEHRRAYNCEIMLSKVKVPLQDLMSSVLALEDSALDIDQVENLIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIHFQSQVSDLRKSLNIVDATVEEIRNSFKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADKLPEVLDFSKDLSNLEPAAKIQLKFLAEEMQAVSKGLEKVIQELSTSENDGPISETFRKTLKDFLRSAEAEVRSLASLYSGVGRKVDALIVYFGEDPSRCPFEQVVSTLLNFTRMFYKAHEENCKQLELEMKKSSDGEKKICESQRILPTAIRTGNVK 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4618g00001 1174 PANTHER FORMIN-J 1 662 - -
Pral4618g00001 1174 MobiDBLite consensus disorder prediction 402 445 - -
Pral4618g00001 1174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Pral4618g00001 1174 Gene3D - 196 340 - -
Pral4618g00001 1174 MobiDBLite consensus disorder prediction 408 434 - -
Pral4618g00001 1174 MobiDBLite consensus disorder prediction 580 705 - -
Pral4618g00001 1174 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Pral4618g00001 1174 MobiDBLite consensus disorder prediction 739 766 - -
Pral4618g00001 1174 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Pral4618g00001 1174 SMART PTEN_C2_2 197 336 IPR014020 -
Pral4618g00001 1174 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Pral4618g00001 1174 MobiDBLite consensus disorder prediction 518 537 - -
Pral4618g00001 1174 Pfam Formin Homology 2 Domain 761 1132 IPR015425 -
Pral4618g00001 1174 Coils Coil 1133 1153 - -
Pral4618g00001 1174 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Pral4618g00001 1174 Gene3D Formin, FH2 domain 756 1143 IPR042201 -
Pral4618g00001 1174 MobiDBLite consensus disorder prediction 545 563 - -
Pral4618g00001 1174 SUPERFAMILY Formin homology 2 domain (FH2 domain) 691 1149 - -
Pral4618g00001 1174 MobiDBLite consensus disorder prediction 462 766 - -
Pral4618g00001 1174 ProSiteProfiles Formin homology-2 (FH2) domain profile. 759 1158 IPR015425 -
Pral4618g00001 1174 MobiDBLite consensus disorder prediction 462 498 - -
Pral4618g00001 1174 SMART it6_source 759 1169 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4618g00001 Pral-Chr4618 462 10329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4618g00001 1 402 Protein tyrosine phosphatase (PTP) family AT5G58160 68.148 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4618g00001 - - aprc:113848377 1551.18