LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4615g00132	ATGTCAGGAGAAGAAGATGTAGCAGTGCCTGCTGAGGCAGCACCCTTGGGTGAGAGTATGGACATCATGACTGCCTTGCAGCTTGTGTTGAGGAAGTCTCTTGCTCATGGGGGTCTTGCACGAGGGCTTCATGAAGCTGCCAAGGTGATCGAAAAGCATGCTGCACATCTCTGCGTCCTTGCGGAGGACTGTGATCAGCCTGATTATGTTAAGCTGGTCAAGGCACTTTGTGTTGATCATAATGTGAAATTGATGACTGTTGCCAGTTCTAAAACCCTTGGCGAATGGGCTGGTCTGTGCAAGATTGATTCCGAGGGCAAAGCAAGGAAAGTAGTTGGCTGCTCCTGTGTTGTTTGA	357	0.4958	MSGEEDVAVPAEAAPLGESMDIMTALQLVLRKSLAHGGLARGLHEAAKVIEKHAAHLCVLAEDCDQPDYVKLVKALCVDHNVKLMTVASSKTLGEWAGLCKIDSEGKARKVVGCSCVV	118

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4615g00132	118	Gene3D	-	4	118	IPR029064	-
	Pral4615g00132	118	SUPERFAMILY	L30e-like	18	100	IPR029064	-
	Pral4615g00132	118	PANTHER	40S RIBOSOMAL PROTEIN S12	11	118	-	-
	Pral4615g00132	118	PRINTS	Ribosomal protein S12E family signature	29	42	IPR000530	GO:0003735\|GO:0005840\|GO:0006412
	Pral4615g00132	118	PRINTS	Ribosomal protein S12E family signature	43	59	IPR000530	GO:0003735\|GO:0005840\|GO:0006412
	Pral4615g00132	118	PRINTS	Ribosomal protein S12E family signature	109	118	IPR000530	GO:0003735\|GO:0005840\|GO:0006412
	Pral4615g00132	118	PRINTS	Ribosomal protein S12E family signature	84	105	IPR000530	GO:0003735\|GO:0005840\|GO:0006412
	Pral4615g00132	118	Pfam	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	25	117	IPR004038	-
	Pral4615g00132	118	ProSitePatterns	Ribosomal protein S12e signature.	25	43	IPR000530	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4615g00132	Pral-Chr4615	1307175	1308941	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4615g00132	18	118	Cytoplasmic Ribosomal Protein Gene Family	AT2G32060	76.238	2.17e-54	165

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4615g00132	K02951		-	qsu:112009898	205.297