Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4615g00120 ATGTTATCCAGAATCGCAGTGACATCTGTTCTGATCATCAACGTTCTTCTTTTCTCACAAGCACAATCTTCGTGGGTTCAATCAGCTTACTGGTTCTCTGGCAGTGGATTTCCAGTTTCCGACATAAACTCTCATCTCTTCACCCACCTCATTTGCGCCTTCGCAAATGTTAACTCTTCGTCCTTCGAGCTTTATGTTGCTTCAGATGACGAGCAATCCTTCTCTACTTTCACGACCACCGTAAGACGAAAGAACCCTTCCGTCATTACGCTTCTCTCCATTGGAGGTGGCCTCGCCGATTACTCTGCGTTATCGTCCATGGTAAGTAACGTGTCTTCTAGGAAATCTTTCATTCAGTCCTCTATAAGAATCGCTAGGTCTTACGCGTTTCAAGGGCTGGATCTATCCTGGGTTTCTGCTAACACCAGCTCTGACATGAACAATATGGGAATGCTTTTTAAAGAGTGGCGAGAAGCTGCAAATTCTGAGGCTCAAAACACTAGTAACCCAGAATTGATCTTAACTGCAGCTGTTCAATTCCGGCCAGGTTCGGATTTTGGATCCTACCCAGTTGAATCAATCAGAAGCAACTTGAACTGGGTGCATGTTATGGCTTATGATTACTACATGCCCACGTGGGCAAATTTTACTGGTGCTCATGCTGCTCTGTATGACCCTTCAAGTGATGTTAACACTGATTCTGGTATTAAGGAATGGATTGGTAGAGGAGTTTCTGCAAACCAGTTGGTTTTGTCTTTGCCTTTTTATGGATATGCCTGGACTCTTGAGAACCCCAAGGACAATGCAATAGGGGCACCAGCTACAGGTCCAGCAATTACAGATGATGGGGATATGAGTTATAAGGACATCAAAGCTTACATTCGGAGATATGGGGCTACAGTACTGTATAATTCTACCTATGTAGTGAAATACTTCTCAGTTGGATCAAATTGGGTTGGTTTTGATGATGCTAAGGTTCTCAAAATTAAGGTGTCTTATGCAAGAGAAAAGAAGCTACTTGGTTATGTTGTGTGGGCTGTTTCTTATGATGACGACAATTGGGAGCTTTCCACTGCAGCAGCTCAAAATTTTGAAGACACTGGACACAGTAGAGGAAGATTATTAGCTATCATTTTGACTCCAATTGCAGTATTTATTCTCCTCTTGGGAGCCATGATGTTTTGCTTAAGGAAGAGAATATTCAGATCCATAGAGATGGTTGAAGCTGCTAGAGGTTCCAAGTTTAAAGCAAATAAAGGAGATGCAGAGCATTTTCATGGCAATGGTCCTGATTTGCAAGTCTTCAGCTTTTCAGACATTGAGGAGGCCACAGATGGCTTTTCCATTGAAAATAAACTTGGGGAGGGTGGTTATGGTCCAGTTTACAAGGGTGTATTAGCAGATGGTCAGGAAATAGCAGTGAAAAAGCTAGCAGAAGCTTCCAAGCAAGGATTTGAGGAATTCAAAAATGAGGTAACACTTACTGCAAGACTACAGCATGTGAATCTTGTTCGGCTCCTGGGGTTCTACATTGATAGAGGTGAACAAATGCTGGTTTATGAGTACATGCCAAACAAAAGCCTTGACTTCTACCTCTTTGATCCTATTAGACGATATTTGCTTGATTGGGGAAAGCGAGTTGACATCATTGAAGGAATTGTTCAAGGGCTTGTTTACTTACAAGAATACTCAAGATTAACAATAATTCACAGAGATATCAAAGCTAGCAATATTTTGTTAAGTGATGAATTGAAGCCAAAGATATCAGATTTTGGTATGGCAAGAATATTCGCAAAAGATGCAGACGAAGCAAACACAAGCAAGATAGTGGGAACCTATGGCTATGTTCCTCCTGAATATGTTAAAAAGGGCCTCTATTCTACAAAATCTGATGTATATAGTTTTGGAGTTTTACTTCTACAAATTATAAGTGGCAAGAGGACTACAAGTCTTTATGGCGAACAAGAAAATTTAAACCTCACAGGATACGCTTATGAACTGTGGAAAGAAGGGAAAGGCATGGACTTTGTGGGTCCTACTCTTGATGACTCATCTTCAACATGTAAATTGTTGAGGTGCATGCAAATTGCTCTGTTATGCGTGCAGGAAAGTGCAAATGACAGGCCTTCTATGTTGGAAATTTCTTCAATGTTGAAAAGGGAAAGCAATTTGACGTTCCCAAAGAAGCCTGCGTTTTCTAGGGAGAATAATGTAGAAGAAGCTAATGAAGGAATAGTGCAGATGGAAACTAAATCCATCAACGAAATGACAGTCTCTGAACTAGTAGCTAGATAG 2295 0.4105 MLSRIAVTSVLIINVLLFSQAQSSWVQSAYWFSGSGFPVSDINSHLFTHLICAFANVNSSSFELYVASDDEQSFSTFTTTVRRKNPSVITLLSIGGGLADYSALSSMVSNVSSRKSFIQSSIRIARSYAFQGLDLSWVSANTSSDMNNMGMLFKEWREAANSEAQNTSNPELILTAAVQFRPGSDFGSYPVESIRSNLNWVHVMAYDYYMPTWANFTGAHAALYDPSSDVNTDSGIKEWIGRGVSANQLVLSLPFYGYAWTLENPKDNAIGAPATGPAITDDGDMSYKDIKAYIRRYGATVLYNSTYVVKYFSVGSNWVGFDDAKVLKIKVSYAREKKLLGYVVWAVSYDDDNWELSTAAAQNFEDTGHSRGRLLAIILTPIAVFILLLGAMMFCLRKRIFRSIEMVEAARGSKFKANKGDAEHFHGNGPDLQVFSFSDIEEATDGFSIENKLGEGGYGPVYKGVLADGQEIAVKKLAEASKQGFEEFKNEVTLTARLQHVNLVRLLGFYIDRGEQMLVYEYMPNKSLDFYLFDPIRRYLLDWGKRVDIIEGIVQGLVYLQEYSRLTIIHRDIKASNILLSDELKPKISDFGMARIFAKDADEANTSKIVGTYGYVPPEYVKKGLYSTKSDVYSFGVLLLQIISGKRTTSLYGEQENLNLTGYAYELWKEGKGMDFVGPTLDDSSSTCKLLRCMQIALLCVQESANDRPSMLEISSMLKRESNLTFPKKPAFSRENNVEEANEGIVQMETKSINEMTVSELVAR 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4615g00120 764 CDD GH18_plant_chitinase_class_V 23 356 - -
Pral4615g00120 764 Gene3D Phosphorylase Kinase; domain 1 409 522 - -
Pral4615g00120 764 Pfam Glycosyl hydrolases family 18 30 350 IPR001223 GO:0005975
Pral4615g00120 764 Gene3D Glycosidases 39 351 - -
Pral4615g00120 764 ProSiteProfiles Protein kinase domain profile. 447 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4615g00120 764 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 412 522 - -
Pral4615g00120 764 SUPERFAMILY Protein kinase-like (PK-like) 431 723 IPR011009 -
Pral4615g00120 764 SUPERFAMILY (Trans)glycosidases 28 366 IPR017853 -
Pral4615g00120 764 Gene3D Transferase(Phosphotransferase) domain 1 523 737 - -
Pral4615g00120 764 FunFam Chitotriosidase-1 255 321 - -
Pral4615g00120 764 SMART 2g34 25 350 IPR011583 GO:0008061
Pral4615g00120 764 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 132 760 - -
Pral4615g00120 764 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 25 367 IPR001223 GO:0005975
Pral4615g00120 764 Gene3D - 255 321 IPR029070 -
Pral4615g00120 764 Pfam Protein kinase domain 448 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4615g00120 764 CDD STKc_IRAK 453 720 - -
Pral4615g00120 764 SMART serkin_6 447 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4615g00120 764 FunFam Uncharacterized protein 523 727 - -
Pral4615g00120 764 SUPERFAMILY Chitinase insertion domain 256 321 IPR029070 -
Pral4615g00120 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4615g00120 Pral-Chr4615 1171649 1174990 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4615g00120 11 367 Glycoside Hydrolase AT4G19810 48.343 1.11e-111 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4615g00120 Glyco_hydro_18 1e-68 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4615g00120 - - gmx:100787480 1039.64