Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4615g00115 ATGGCTTCCACTCATTCCTTCCTCCTCTTCTCTATTCTCCTTCATCTTCATTTTCACTCCTCAACTTCACAAAGTTGGGTCAAAGCTGGTTATTGGTATGCTGGCAGTGAATCCCCCATTCCTGACATAAACTCTGCTTTGTTCACGCACCTTATATGCGCCTTCGCTAGCGTCAATTCCTCAACTTACGAGATTTCCATAGCCAAATCTGACCTGCAATATTTCTCCACCTTCACCAACATCGTCAAGAGTAAAAACCCCTCGATCGTCACTCTTTTCTCTGTATGGAACGGACAGGCAGAAACTGCACAGGGTATTCTGGGCAAGAAGGCGAACGATTCGGTCCTTTCTTCTATGCTCCGAACCGCTTCTTCACGAAAATCTTTCATTCAGTCCTCCATACAAACAGCTAGACGCTATGGGTTTCAGGGCATTGACTTGTTCTGGCTTTGGCCTCAAGCAGAATCGGATATGACCAACTTGGGAATTCTGCTTCACGAATGGCGACTTGCTGTGGATTCTGAGAACAGAAGCTCTGGAGAATCGTCGTTGATATTGAGTATGGGTCTTCATTACTTGCCCACTGTTTTTGGGAATCTGAGTTATCCCGTTGATTCTTTGGTGAAGAATCTGAACTGGGGTCATATTCTGGCTTATGATTATCATCTTCCGTCACTGGAAAATTTCACGCATCCTCATGCTGCTCTGTATGATCCTACAAGCCATGTGAATACTGATTTTGGTATAAGGAAATGGCTGAGCAGAGGATTTCCTTCTAATAAGCTGCTTCTGGGATTGCCTTACCATGGCTACGCTTGGGCATTGGATAGTCCCAAGGAAACCGCGATTGGTTCCCCATCATCGGGTGTGGCTGTGACACAAGATGGGTCTATGAGCTACAAGTATATCAAGTGGTATGTTCGGAGTTATCGTGCACCTACGTTGTATAATGCTACCTATGTCGTGAATTATTGCACCATTGGTTCCATTTGGATCAATTTTGATGACGTTGAAGCTATCAAAACTAAGGTTGCTTATGCCAAGGAAAAGAATCTGCTGGGTTACAATGTGTTTCAGGTGATAAATGATGATAATTGGGTGCTTTCTGAGGCAGCTCAAGATGAAGAAACTGATCAGGGAAACAGACGGAGGCTATTACTTATTATTTTACTTCCAGTTGCAATCGTCATAACATTGGGAGTCTTTCTTCTGTGCTGCTTCAGAAGCAAGTCATTCAAATCAAAAGTGAAGATGGTGCTTGGCAAAAGTTTGCCGTCTGAACCAGAAGGTTCCATCCGCCATGCTGAGAGCATTGAAACCAGTGCTCCACATCTTGAAGAATTTAGCTTTGCCGTCATAAGAGCGGCAACAAAAGATTTTTCTGTAGAAAACAAGCTAGGAGAGGGTGGATTTGGCTCTGTTTACAAGGGAGAACTACCAGGAGGACAAGAAATTGCAGTCAAGAGACTTTCGAAAGCTTCCACCCAAGGACATGAAGAATTTACAAATGAGGTTTCACTTACTGCAAGGCTTCAGCATATCAATCTGGCTAGAGTTTTGGGATTCTGCAATGAGAGAGAAGAAAAAATTCTAATCTATCAGTACATGCCTAACGGAAGCTTGGATTTCTACCTCTACGATCCAATAAGAAAGCATCTATTGGATTGGGGGATGCGTGTTCATATTATTGAAGGAATTATCCAAGGACTTCTATATCTCCAAGAATATTCAAACTTCACAATAATTCATCGAGATTTAAAAGCTAGCAACATCTTGCTTGATGATAAGATGAATCCAAAAATATCAGATTTTGGAATGGCTAAACTGTTTAGAAAAGATGAAGTTGAAGCAAACACTGGGCGAATCGTTGGGACATATGGTTATGTTCCTCCAGAATATGTTAGAAAAGGCACATACTCAATGAAGTATGATGTTTATAGCTTTGGAGTAGTGCTTTTGCAAATCATCAGTGGCAAGAGGAACACTAGCTATTATGGCACTCATGAGAACTTGAGCATTCTTGAATATGCTTATAATTTGTGGAAAGAGGGTAAAGGTTTGGAATTTGTTGATCCATCTCTAGAAGATTCATCTTCTTCATGCAAACTTCTGCAATGTTTGCATGTAGCCCTACTCTGCGTGCAGGAAAATCCAGCAGAAAGGCCATCAATGCTGGAGGTTTCTTCCATGCTTAAGAATGAAACTGAGGCACTCCCTTTGCCTAAAAAGCCAGCTTTCTCAACAAAAAGTGATGAAAAATTAGAAGACGGATCCTCAACATCACAGTCACAGAAAGCACGTTGTTCCATAAACGATGCTTCAATTTCCCAAATAACGCCCAGGTAA 2346 0.4194 MASTHSFLLFSILLHLHFHSSTSQSWVKAGYWYAGSESPIPDINSALFTHLICAFASVNSSTYEISIAKSDLQYFSTFTNIVKSKNPSIVTLFSVWNGQAETAQGILGKKANDSVLSSMLRTASSRKSFIQSSIQTARRYGFQGIDLFWLWPQAESDMTNLGILLHEWRLAVDSENRSSGESSLILSMGLHYLPTVFGNLSYPVDSLVKNLNWGHILAYDYHLPSLENFTHPHAALYDPTSHVNTDFGIRKWLSRGFPSNKLLLGLPYHGYAWALDSPKETAIGSPSSGVAVTQDGSMSYKYIKWYVRSYRAPTLYNATYVVNYCTIGSIWINFDDVEAIKTKVAYAKEKNLLGYNVFQVINDDNWVLSEAAQDEETDQGNRRRLLLIILLPVAIVITLGVFLLCCFRSKSFKSKVKMVLGKSLPSEPEGSIRHAESIETSAPHLEEFSFAVIRAATKDFSVENKLGEGGFGSVYKGELPGGQEIAVKRLSKASTQGHEEFTNEVSLTARLQHINLARVLGFCNEREEKILIYQYMPNGSLDFYLYDPIRKHLLDWGMRVHIIEGIIQGLLYLQEYSNFTIIHRDLKASNILLDDKMNPKISDFGMAKLFRKDEVEANTGRIVGTYGYVPPEYVRKGTYSMKYDVYSFGVVLLQIISGKRNTSYYGTHENLSILEYAYNLWKEGKGLEFVDPSLEDSSSSCKLLQCLHVALLCVQENPAERPSMLEVSSMLKNETEALPLPKKPAFSTKSDEKLEDGSSTSQSQKARCSINDASISQITPR 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4615g00115 781 SUPERFAMILY (Trans)glycosidases 27 375 IPR017853 -
Pral4615g00115 781 SMART 2g34 26 363 IPR011583 GO:0008061
Pral4615g00115 781 Gene3D - 268 334 IPR029070 -
Pral4615g00115 781 ProSitePatterns Protein kinases ATP-binding region signature. 466 488 IPR017441 GO:0005524
Pral4615g00115 781 Pfam Protein kinase domain 461 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4615g00115 781 MobiDBLite consensus disorder prediction 759 781 - -
Pral4615g00115 781 MobiDBLite consensus disorder prediction 735 781 - -
Pral4615g00115 781 Gene3D Glycosidases 42 365 - -
Pral4615g00115 781 ProSiteProfiles Protein kinase domain profile. 460 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4615g00115 781 FunFam Chitotriosidase-1 268 334 - -
Pral4615g00115 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Pral4615g00115 781 SMART serkin_6 460 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4615g00115 781 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 215 778 - -
Pral4615g00115 781 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 379 IPR001223 GO:0005975
Pral4615g00115 781 SUPERFAMILY Protein kinase-like (PK-like) 444 751 IPR011009 -
Pral4615g00115 781 CDD STKc_IRAK 466 733 - -
Pral4615g00115 781 Gene3D Transferase(Phosphotransferase) domain 1 536 743 - -
Pral4615g00115 781 Gene3D Phosphorylase Kinase; domain 1 427 535 - -
Pral4615g00115 781 SUPERFAMILY Chitinase insertion domain 269 334 IPR029070 -
Pral4615g00115 781 FunFam Uncharacterized protein 435 535 - -
Pral4615g00115 781 CDD GH18_plant_chitinase_class_V 24 369 - -
Pral4615g00115 781 FunFam Uncharacterized protein 536 740 - -
Pral4615g00115 781 Pfam Glycosyl hydrolases family 18 30 360 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4615g00115 Pral-Chr4615 1110709 1132676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4615g00115 439 781 Receptor kinase-like Gene Family AT4G11530 52.312 2.13e-119 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4615g00115 Glyco_hydro_18 1.6e-58 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4615g00115 - - jre:109019491 1078.93