Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4615g00079 ATGGGTAGTACCAATAGTCGACACGTTTCTCGCCCTTCTTCTCGGCGAGTCAACCACACCAACCGCTTCAGTCTTTCCTCTCTTCTTCCCTGCGGTGCCTCCACTTCTCGCGCTACTTATGAGATTGAAGATCATCCAACTGAACTTCTAGTAGACTCTGCTACAGACTTTAATGATCAAGTTCAGAAAGTTACAGAGGAATCGTCTTTATCACATTCAACAGAAGCTGGAATTAGCCGCTCACATGGTCAAACTGGAACCTCCTTTGGCAGCAGTATTCAATCCTGTGAGAATGCTAATCTTCAAGATTCTTCCAGAAGTGTTGCAACCAGCAATCAGAGGGAGTGTTTGTTTAAAAGAAAGGAGTTAGTTTCTCCTTATGAGGTAAGTACTGATCATAGTTATAATGAATCTTATAGGGATAGCAGCAACACAGCTAGTGCTTCATTTGTAGAACAAAAGTCTTCAGATCCAGTCTCTGTAAATAGTTCCGCTAACAAGGATGCAGTTAATAATATTGATAATTCAGTGGATAGTAGTATCCATCCAATATCTCATGAGACATTGCATCTAAGGAGTTCATCCCCTCAAGTGTCTGAAGACTCCGGTTCTCATGAAAATTATGTTGAGAGTCATAGTAGTGCAGCTATAGCTTCCCAGAATTCTGATTCAAGTCCCAGTTCTCAAGGTTCAGATCTGCCTGTAACTTCTCTGTTGCAAGAAAATGAATCTCATGAAGAAACAATTCCTCCAAGTTTAGGGTTTCTTGTTCCCGACCGGGAAAGAGGACATGTGAATGAGGGTGTGCTTCATGTTGACGTGGTTACTATATCTTCCAATACTCTGTCTTATAGCAACACTGATGCCATTGATCGTAGTACCAGGAGAAATGGTAGGAGACCATTTTGGGATGCTTTTTCAAATCGTAGTTCAAGAAGTGGTTTCTCAAATGATGAGGTTGGAGAGGATTTTGAATATCTTGGCAGTAGAATCCGCAGATCTAATGCACGAATGCTGCACTCAAGATCTCAGATCTGGGAAAGACTTCGTGATGGCCTTAATGAAACAGATCGGTGGACTAATTCTTGTCCATTAGGACTCCATCCTGATGGCAGGTGTTTCTGTGAGCCTTTCTCCATGTCCGAGGAATCTAATACTCGAGCTAGCATGTCAAGAATAGTCATGCTTGCAGAAGCTTTATTTGAGTTTTTAGATGAAGTTCATCGCCAACCCACGCCATTTTCACTATCTGTGGCCTCTCTCCCAGCGCCAGAGTCAGTTGTTGATGCTTTCCCTCTGAAGTGTCACAAAACGGTTGGCACAGCTGATGGTGTTAGTAATACTGAACAATGCCATATATGCCTGGTGGAGTATGAAGAAGGGGACAAAATTCGTGTTCTGCCTTGCAATCATGAATTCCACATGGCATGCGTTGATAAGTGGCTTAAGGAAATACATGGTATTGTCATTGAAACTTGA 1479 0.4239 MGSTNSRHVSRPSSRRVNHTNRFSLSSLLPCGASTSRATYEIEDHPTELLVDSATDFNDQVQKVTEESSLSHSTEAGISRSHGQTGTSFGSSIQSCENANLQDSSRSVATSNQRECLFKRKELVSPYEVSTDHSYNESYRDSSNTASASFVEQKSSDPVSVNSSANKDAVNNIDNSVDSSIHPISHETLHLRSSSPQVSEDSGSHENYVESHSSAAIASQNSDSSPSSQGSDLPVTSLLQENESHEETIPPSLGFLVPDRERGHVNEGVLHVDVVTISSNTLSYSNTDAIDRSTRRNGRRPFWDAFSNRSSRSGFSNDEVGEDFEYLGSRIRRSNARMLHSRSQIWERLRDGLNETDRWTNSCPLGLHPDGRCFCEPFSMSEESNTRASMSRIVMLAEALFEFLDEVHRQPTPFSLSVASLPAPESVVDAFPLKCHKTVGTADGVSNTEQCHICLVEYEEGDKIRVLPCNHEFHMACVDKWLKEIHGIVIET 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4615g00079 492 Pfam RING-like zinc finger 450 478 IPR001841 -
Pral4615g00079 492 ProSiteProfiles Zinc finger RING-type profile. 451 481 IPR001841 -
Pral4615g00079 492 MobiDBLite consensus disorder prediction 63 93 - -
Pral4615g00079 492 MobiDBLite consensus disorder prediction 1 29 - -
Pral4615g00079 492 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 488 - -
Pral4615g00079 492 SUPERFAMILY RING/U-box 445 483 - -
Pral4615g00079 492 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 416 487 IPR013083 -
Pral4615g00079 492 FunFam Putative RING zinc finger domain superfamily protein 418 489 - -
Pral4615g00079 492 MobiDBLite consensus disorder prediction 146 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4615g00079 Pral-Chr4615 859177 863911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4615g00079 362 489 C3H Transcription Factor Family AT5G45290 50.704 2.10e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4615g00079 - - pcin:129320229 530.791