Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4615g00077 ATGGCGGAACAAACTGAGAAGGCTTTTTTGAAGCAGCCAAAAGTGTTTCTAAGCTCAAAGAAATCTGGGAAGGGAAAGAGGCCTGGAAAAGGAGGGAATCGCTTTTGGAAGTCTGTTGGACTTGGATTCAAGACTCCCAGGGACGCTATTGAAGGCTCTTACATTGATAAGAAATGCCCCTTCACTGGCACTGTTTCTATCAGGGGTCGTATTCTAGCTGGCACCTGTCATAGTGCTAAGATGACAAGAACCATTATTGTTAGAAGGAACTACCTTCATTTTGTCAAGAAGTACCAGAGGTATTCCCTCTCATCTGGCTGTTATGCTCATTTTTCATTTTATTTGGCCTTTGCAGCATTGTTTCGGCTTAACTTGTAA 378 0.4286 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSVGLGFKTPRDAIEGSYIDKKCPFTGTVSIRGRILAGTCHSAKMTRTIIVRRNYLHFVKKYQRYSLSSGCYAHFSFYLAFAALFRLNL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4615g00077 125 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 10 111 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pral4615g00077 125 SUPERFAMILY Nucleic acid-binding proteins 68 103 IPR012340 -
Pral4615g00077 125 Pfam Ribosomal_S17 N-terminal 4 72 IPR032440 -
Pral4615g00077 125 Gene3D - 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4615g00077 Pral-Chr4615 842905 844694 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4615g00077 1 112 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 85.841 2.28e-57 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4615g00077 K02949 - csav:115694691 191.815