Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4615g00022 ATGTCCTCAGACCACTCGAATGGGGACTGCGAGTCCCTCCATCAACCCTTGCTTCATTCCGAAAGACCCAGGATCAATTCCACGTCGCAGGTTGCCATTGTTGGAGCCAATGTCTGTCCCATTGAGAGCCTTGACTATGAGATTTTCGAGAACGAGTTCTTCAAGCAGGATTGGAGGTGCCGAGGGAAGATTCAGAAATTCCAGTACCTTTTCATGAAGTGGGTTTTGTGCTTGTTGATTGGTGGGATTGTTAGCTTGGTTGGATTTTGCATTAATCTCGCGATTGAGAATCTCGCCGGCCTCAAGTTCGTGATCACATCTGACATGATGTTGCAGGGGAGGTTTCTCCTGGCCTTTGTAGTATTTTTTTCTTCGAATTTGGTTCTCACTCTTTTTTCTACTATAATCACGGCTTTTATAGCGCCTGCGGCCATGGGTTCTGGTATACCAGAGGTGAAAGCCTACTTAAATGGGGTAGATGCCCCTGGAATATTTACGCTTAGAACTCTGTTCGTTAAGGTTATTGGAAGCATTTCAGCAGTTTCATCATCCCTTCTTATTGGAAAGGCTGGGCCTATGGTGCATATAGGTGCATGTGTGGGATCATTGTTGGGTCAGGGTGGTTCAAACCGATATCGACTAACATGGAAATGGTTACGTTTTTTTAAGAACGACCGTGATCGACGGGATCTAATAACATGTGGATCAGCTGCTGGAATTGCTGCAGCCTTCCGTGCCCCAGTTGGTGGGGTCTTGTTTGCTTTCGAAGAGATGGCATCTTGGTGGAGAAGTGCCCTTCTGTGGAGAACTTTCTTCTCAACAGCAATAGTTGCACTTGTGCTTCGTGCATTGATAGATGTTTGTTTAAGTGGTAAATGCGGGCTATTCGGTAAAGGTGGGCTGATTATGTTTAATGCTTATTCAGAAAGTATTTCATATCATCTGGTGGATGTGCTACCTGCAATAATTCTCGGAGTTATAGGAGGCTTACTTGGAAGCTTATATAATGCTCTGTTGAGCAGGGTTCTCCGTGTCTACAACATGATCCACGAGAAAGGCATTGCATACAAAATTTTGCTTGCTTGCTTGATCTCCATTATTACTTCTGTTCTTCTTTTTGGATTGCCATGGCTTGTATATTGTCAACCTTGTCCAGTTGATGCCCCTGAGGAATGTCCTACAATCGGCCGTTCTGGTAACTACAAGAAATTCCAATGCCCTCCCGGTCATTACAACGATCTTGCCAGCCTTTTTTTTAACACATGCGGTGATGCTATCAAAAATCTATTTAGCAAAGGCACAGATGAGGAGTTTACATATCCATCAATGTTTATCTTTTTCATCACATGCTTTTTTCTAAGCATCTTTAGCTATGGGGTTGTTGCTCCAGCTGGTCTTTTTGTGCCAAATATTCTGATTGGTGCATCTTACGGGCGTGCGGTTGGTATGTTGGTTGGCAAAAGTTCGACTCTTAGCCATGGCCTTTTTGCTGTATTGGGTGCTGCTTCCTTTCTTGGAGGATCTATGAGAATGACTGTTTCCCTATGTGTAATCTTACTAGAACTAACAAATAATTTGTTGTTGCTACCCTTGATGATGCTGGTGCTTCTGATATCTAAGACTGTAGCTGATGCTTTCAATGCAAGTATATATGACCTTATCATGAAAGCAAAAGGGTTTCCTTATTTAGAAACTCATGCTGAGCCATATATGAGGCAGCTAACAGTAAGTGATGTAGTCACAGGTCCGCTACAGGTCTTTAATGGCATTGAGAAGGTTCGCAACATTGTGTTTGTCCTCAAGACTTCAAGTCATAATGGGTTCCCTGTGGTTGATGAGCCTCCATTTTCTGAAGCCCCAGTTTTATATGGTACGATTCTTCGTCAACATCTTCTCACGGTGTTAAAGAAGAAAGATTTCTTGCGTACACCAATGGCAATAGGAGATAATGCCTATGATAGTTTTTCTTGTGATGAATTTTCAAAGAGGGGTTCTGGCAATAGTGACAAGATAGATGATATACAGTTTACTGAGGAAGAGTTGGACATGTACATAGATCTCCATCCATTTAGTAATGCTTCACCCTATACCGTCGTGGGGACAATGTCTCTGGGAAAGGCCCTTACGCTTTTTCGGGAAGTCGGTTTAAGGCATCTTCTGGTTATACCCAAGGTCTCTAGTAGATTACCGGTCGTCGGAATACTAACAAGGCACGATTTTATGCCAGAGCACATTCTGGGGTTGCATCCTTTGCTGGAAAGAAGCAGATGGAAAAGATTAAGAATAAAATTTCCTTTTATGAACAAGTTCTTCTAA 2316 0.4283 MSSDHSNGDCESLHQPLLHSERPRINSTSQVAIVGANVCPIESLDYEIFENEFFKQDWRCRGKIQKFQYLFMKWVLCLLIGGIVSLVGFCINLAIENLAGLKFVITSDMMLQGRFLLAFVVFFSSNLVLTLFSTIITAFIAPAAMGSGIPEVKAYLNGVDAPGIFTLRTLFVKVIGSISAVSSSLLIGKAGPMVHIGACVGSLLGQGGSNRYRLTWKWLRFFKNDRDRRDLITCGSAAGIAAAFRAPVGGVLFAFEEMASWWRSALLWRTFFSTAIVALVLRALIDVCLSGKCGLFGKGGLIMFNAYSESISYHLVDVLPAIILGVIGGLLGSLYNALLSRVLRVYNMIHEKGIAYKILLACLISIITSVLLFGLPWLVYCQPCPVDAPEECPTIGRSGNYKKFQCPPGHYNDLASLFFNTCGDAIKNLFSKGTDEEFTYPSMFIFFITCFFLSIFSYGVVAPAGLFVPNILIGASYGRAVGMLVGKSSTLSHGLFAVLGAASFLGGSMRMTVSLCVILLELTNNLLLLPLMMLVLLISKTVADAFNASIYDLIMKAKGFPYLETHAEPYMRQLTVSDVVTGPLQVFNGIEKVRNIVFVLKTSSHNGFPVVDEPPFSEAPVLYGTILRQHLLTVLKKKDFLRTPMAIGDNAYDSFSCDEFSKRGSGNSDKIDDIQFTEEELDMYIDLHPFSNASPYTVVGTMSLGKALTLFREVGLRHLLVIPKVSSRLPVVGILTRHDFMPEHILGLHPLLERSRWKRLRIKFPFMNKFF 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4615g00022 771 Gene3D - 564 742 IPR046342 -
Pral4615g00022 771 CDD CBS_pair_voltage-gated_CLC_euk_bac 575 743 - -
Pral4615g00022 771 Pfam Voltage gated chloride channel 130 544 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4615g00022 771 FunFam Chloride channel ClC3 65 382 - -
Pral4615g00022 771 Gene3D Clc chloride channel 65 563 - -
Pral4615g00022 771 SUPERFAMILY CBS-domain pair 566 741 IPR046342 -
Pral4615g00022 771 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 19 747 - -
Pral4615g00022 771 ProSiteProfiles CBS domain profile. 690 751 IPR000644 -
Pral4615g00022 771 SUPERFAMILY Clc chloride channel 51 565 IPR014743 -
Pral4615g00022 771 PRINTS Chloride channel signature 173 192 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4615g00022 771 PRINTS Chloride channel signature 462 482 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4615g00022 771 PRINTS Chloride channel signature 494 510 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4615g00022 771 PRINTS Chloride channel signature 142 159 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4615g00022 771 PRINTS Chloride channel signature 237 256 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4615g00022 771 PRINTS Chloride channel signature 512 531 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4615g00022 771 PRINTS Chloride channel signature 550 564 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pral4615g00022 771 PRINTS Plant CLC chloride channel signature 47 55 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pral4615g00022 771 PRINTS Plant CLC chloride channel signature 272 282 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pral4615g00022 771 PRINTS Plant CLC chloride channel signature 414 430 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pral4615g00022 771 PRINTS Plant CLC chloride channel signature 290 297 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pral4615g00022 771 PRINTS Plant CLC chloride channel signature 258 266 IPR002251 GO:0005247|GO:0006821|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4615g00022 Pral-Chr4615 296506 301184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4615g00022 11 768 Ion Channels AT5G33280 76.517 0.0 1162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4615g00022 K05016 - qsa:O6P43_002449 1205.28