Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4615g00001 ATGGATGCCAACAATGAGAATCAGGAACATGCTTCTGTTTGTTCTTTTAATCCTATGATGTTGTCTACTGATCATGTTTACCTTGCAGTGTTAAATGCTGCTATTGAGCTGAACTTGTTTGAGATTATTGGTAAGGGAAGCCCTAAGGGCATGTCTGCCTCCGAAATCGCTTCCAAGCTAGGGACTCCACACGCCGGCATGGCTCATCGGCTAGACCGAATGTTGTTTTTGCTTTCTAATTACTCTTTCTTGACTTGTTCTTCCAACAAACTTGATCAACATGGTAAGATTGAGAGGCTTTATGGTCTATCTCCTGGTGGTAAATACTTAATCACCAATGAAGATGAAACTTCTTACGTTAGACTCTTCAAATTATGTAATCATCCCACTTTCATAAAGATTTGGCAAAACTTCAAGCAAGTGATTCTTGATGAGGAAGAGGACCTTTTCAAGACAGTTAATGAGATGTCTATTTACGAATATATGGAAATGGATCCAACGTTCAAAACTACTTTTCATGGGGCAATGGCTGATTTATCGATCATACAGATGAAGGATGTACTTGAGACATATAAAGGATTTGAGGGAATATCAACACTTGTTGATATGGGTGGTGCCATTGGCCAAAGTCTTAGAATGATCGTCTCCAAGTATCCTTCAATTCAGGGCATTAACTTTGACTTACCATCCGTCGTACAACATGGCCTATCCCATCCAGGAATAAAGCATGTTGGAGGAGATATGTTCAAAAGCGTTCCACAAGGTGATGCTATAATGATGAAGTTTATAACTGATAACTGGGCAGATGAAAACTGCATACAGATTTTAACAAACTGCCATAGATCTCTCAAAAACGAAGGCAAGCTTATTATTATTGACCTGATAATGCCAGAAATACCAAATGGAAGCGATGAGCATAAATATGTTTCAGTTCTTGACAATCTCATGTTCTTGCAAGCTGGTGGAAAGGAACGAACTGAGAAAGAATTCGAAGCTCTTTGTAGAGCTAGTGGCTTTTCCAGCTACAAAATTGCAGCTCGTGTTCCTTCCGCAGCTTTAGGAGTCATTGAGTTTTACAAATAA 1083 0.3924 MDANNENQEHASVCSFNPMMLSTDHVYLAVLNAAIELNLFEIIGKGSPKGMSASEIASKLGTPHAGMAHRLDRMLFLLSNYSFLTCSSNKLDQHGKIERLYGLSPGGKYLITNEDETSYVRLFKLCNHPTFIKIWQNFKQVILDEEEDLFKTVNEMSIYEYMEMDPTFKTTFHGAMADLSIIQMKDVLETYKGFEGISTLVDMGGAIGQSLRMIVSKYPSIQGINFDLPSVVQHGLSHPGIKHVGGDMFKSVPQGDAIMMKFITDNWADENCIQILTNCHRSLKNEGKLIIIDLIMPEIPNGSDEHKYVSVLDNLMFLQAGGKERTEKEFEALCRASGFSSYKIAARVPSAALGVIEFYK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4615g00001 360 Gene3D - 1 110 IPR036388 -
Pral4615g00001 360 Pfam O-methyltransferase domain 135 340 IPR001077 GO:0008171
Pral4615g00001 360 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pral4615g00001 360 CDD AdoMet_MTases 199 296 - -
Pral4615g00001 360 Gene3D Vaccinia Virus protein VP39 111 360 IPR029063 -
Pral4615g00001 360 PANTHER O-METHYLTRANSFERASE 21 342 IPR016461 GO:0008168
Pral4615g00001 360 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Pral4615g00001 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 345 IPR029063 -
Pral4615g00001 360 SUPERFAMILY "Winged helix" DNA-binding domain 20 115 IPR036390 -
Pral4615g00001 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 360 IPR016461 GO:0008168
Pral4615g00001 360 FunFam Caffeic acid 3-O-methyltransferase 2 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4615g00001 Pral-Chr4615 18681 20394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4615g00001 19 346 Monolignol Biosynthesis Gene Families AT5G54160 49.697 7.20e-104 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4615g00001 - - gmx:100802593 360.147