Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4614g00010 ATGGCACATCCAGCGCTATCTTCTTCTATCACTTACAAATGGACTTATGATGTGTTCCTTAGTTTTTATGGTGATGATACTCGCTTAGGCTTCACTAGCTATCTCTACCATTCTCTGCATCAAAGCGGAATTCGCGCCTTTCGCGATGATGAATTCATTAGGATTGGAGAAAATATCACACCCGCGCTTTTTGAAGCTATACAAAAATCAAGAATAGCCATCATAGTTTTCTCAAAAAACTATGCAAACTCAACATTTTGTTTGCGAGAACTTGAAGAGATTCTGGAGTGCTTCAAGGAAGAGAGTCGGTTGATATATCCAGTATTTTATTATGTGGATCCATCAGAACTACGATGTCCCAGAGAAAGCTATGCAGCAGCATTGGCTCGACTGGAGGAAAGATTCGAGGACAATCTGCACAAGGTGGAAAAATGGAGGCTCGCTCTGTCTCAAGCTGCTGACCTCAGAGGCTGTCATCTCAAACCCAAGATTGCCAATGAACAAGAGTTTGTTACAAGGATCACGAATGTTGTTGCTGCTAGGATTAACCGGTTGCGTTTAGATATTGCAAAATATCCCGTTGGACTTGTGGCTCGAGCCAAGAGAGTTATCTCTTGTTTAGATCTTTGGTCCGCAAAGGAAATTAAAATGATAGGAATTTGGGGAGCTGGTGGAATAGGTAAATCAACTATTGCTAGGGCTGTATATAATTCAATTGCTGATAATTTTGAAGGCTTGTGTTTTCTTTCTAGTGTAAGAAAGCGCTCCAAAATGCCACATGGTTTGCCACATCTTCAAGAGACATTATTGCGTGAATTAGTCATGGAGGAAGATCTCAAACTGAATGATTATCATGAGGGAATACCAATAATAGAGCATAGGCTTAGTCAGAAGAAGATTCTTTTGATTCTTGATGATGTTGACGAATTAAATCAATTAGACGCACTTGCTGGAAGTTGCAATTGGTTTGGTTGTGGAAGTAGAATTATCATCACGACCAGAGATAAGCAATTACTTGTAAGTCATGGTGTTACAAGCATTGATGAAGTCAAGGAATTAAATTATGAGGAATCTCTTAAGTTGCTTAGCTGGTGTGCATTTAAAAAAGAAAATGTGGATTCCAACAACATGGAGGCTTGCAATCGTGCAATACGTTATTCGTGTGGCTTTCCATTAGTTTTAGAATTGATTGCTTCTAAATTGTGCGGCAAAAGAGTTAATCTCTGGAGTGCTGCATTGGATATATTAAAAAGCACACCAGATCAAAGAGTTCTGGATGCCTTGAAATTAAGCTATGATAGTTTAGGGGAAGTAGAGAAACAAGTTTTCCTTGACTTGGCTTGTTTTTTCAATGGTGAGAAGTTAGCATATGTCATTCATATCTTGCAATGTGTTCGGGGGATCCAACAGCCAGAATATGTTATTGAAGTGCTGATTGATAAATCCCTTGTAAAGCTTGAACAAGATGTTGTAACAATGCATGACTTAATAGAAGATGCCGGTAAAGAGATTGTTCGACAAGAATCATCATATCAGCTTGGTAAACAAAACAGATTATGGTCCTATCAAGACATCCTTCATGTCTTAGAACAAGACAAAGTAAGATCACCAACATGTACTCTTCAATTTCTATGA 1635 0.3865 MAHPALSSSITYKWTYDVFLSFYGDDTRLGFTSYLYHSLHQSGIRAFRDDEFIRIGENITPALFEAIQKSRIAIIVFSKNYANSTFCLRELEEILECFKEESRLIYPVFYYVDPSELRCPRESYAAALARLEERFEDNLHKVEKWRLALSQAADLRGCHLKPKIANEQEFVTRITNVVAARINRLRLDIAKYPVGLVARAKRVISCLDLWSAKEIKMIGIWGAGGIGKSTIARAVYNSIADNFEGLCFLSSVRKRSKMPHGLPHLQETLLRELVMEEDLKLNDYHEGIPIIEHRLSQKKILLILDDVDELNQLDALAGSCNWFGCGSRIIITTRDKQLLVSHGVTSIDEVKELNYEESLKLLSWCAFKKENVDSNNMEACNRAIRYSCGFPLVLELIASKLCGKRVNLWSAALDILKSTPDQRVLDALKLSYDSLGEVEKQVFLDLACFFNGEKLAYVIHILQCVRGIQQPEYVIEVLIDKSLVKLEQDVVTMHDLIEDAGKEIVRQESSYQLGKQNRLWSYQDILHVLEQDKVRSPTCTLQFL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4614g00010 544 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Pral4614g00010 544 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral4614g00010 544 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral4614g00010 544 Gene3D - 352 436 IPR042197 -
Pral4614g00010 544 Gene3D - 10 188 IPR035897 -
Pral4614g00010 544 SUPERFAMILY "Winged helix" DNA-binding domain 423 530 IPR036390 -
Pral4614g00010 544 Gene3D - 189 347 IPR027417 -
Pral4614g00010 544 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 446 IPR027417 -
Pral4614g00010 544 SMART till_3 15 155 IPR000157 GO:0007165
Pral4614g00010 544 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 531 IPR044974 GO:0006952
Pral4614g00010 544 Pfam TIR domain 16 178 IPR000157 GO:0007165
Pral4614g00010 544 PRINTS Disease resistance protein signature 217 232 - -
Pral4614g00010 544 PRINTS Disease resistance protein signature 294 308 - -
Pral4614g00010 544 PRINTS Disease resistance protein signature 387 401 - -
Pral4614g00010 544 Pfam NB-ARC domain 211 424 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4614g00010 Pral-Chr4614 228415 230465 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4614g00010 214 530 WRKY Transcription Factor Family AT5G45050 36.646 3.13e-54 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4614g00010 - - pcin:129289024 720.309