Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4614g00008 ATGTGCTTTTCAATTTGGAAGGGGACAAACAAAATTGAAGCCATAACTCTAGACTTGCCTGAAAATATAGAAGTACAATGGAGTGGGGAGGCATTTGTGAAGATGAAAAGTCTCAAAATGCTTGTGATAAAAAAAGCATGCTTTTCTGAATATCCCAAATATCTGCCAAAGAGTTTAAGGTGGTTGGAATGGAAAGGGTATTCTTTCAAATTTTTACCATCTTTATGTGCAACTGAACTTGTCTATCTTGACTTGTCCTTTAGTTTTTGTGAATTGCTCCAACCATTTGATAAGAAATTTCGCAATTTAAGTAGTATGAAGTTAAGAAATTGTCAATCTCTACTGCAAATACCAGACTTATCGGGAGCTTCTAATTTAAGAGAATTATGGCTTGATGGCTGCACAAATTTAATTGGAATTCATGAGTCAGTTGGATGTTTAGAAAAATTGAGAGAATTGAGTGCTATGCGATGCGAAAAGTTGAAGATATTGCCATCTTGCCTTCGGTTGACATCTCTTAGACATCTGAACCTCTTTGGTTGTTCAAGTCTTCAGACATTTCCAGAAGTATCAGTCATGATGGTAGAAATGCAAACACTTGACTTGGACAAGACAGCAATTACGGAATTGCCATCTTCAATTTGCAATCTTGTTGGACTTGAAATCTTACACATGGAAGAATGTCCTAATCTTATGCAATTACCAGCTAGCATTTGTACATTACCAAACCTTTGGAAACTGACAGCAAATTCTTGTGAGCGAATGAGTGATATTAAGATGTGTGAAGGTGGAGATAAAGCAAGCTCGGATTTATCAGCAACATTGTTGAAAATGGAACAGCTTTGTTTCTCAAATTGCAATTTATCAGATGATTCTCTTACTTTCTGTCTTTCTTACTTCAGTAATATGATATATTTAGATCTAAGTCTTAATAATTTCATGAGTCTTCCAGAATGCATCAAAGAATATCACAATTTGAAATATCTCTTTTTGGATCATTGCGATCAGCTTCAACATATTAGAGAGATGCCACCAAACTTGGAAAAATTCAGTGCTATATGTTGCACATCATTGACTAAATTATCGAAAAGCAAAGTATTGAAGCAGGTATTCAACTTTCAATCTGGTAAAAGAAACTTTATTTTGCCCGGAAACAAATTTCCAGAAAGGCTCCATTATTATAGTCGGGGAAGTTTTGTGTCATTTTGGGTTCGTAACGTGTTCCCAATGGCTTTTTTATGGATTCTTGTTAAAGATGATCAGGATTATGTCTACAACTTCAAATTATCAGTGCACTTCAATAACACCAAGCTGGATATTTCTTCTGAGTGGCTTTTACTGTCAACAATAAAGACTGATCACATTTTTATATGTGACATGCGAAGCATAATTCACAGTACTGAACTCCCCCTTCAAAATAAGTGGAATCAAGTGAAGGTTTCCCTTGAGAGCAAAACACCGGAAATAAAAGGCGAAAAAGGAATCTGTTTTGGTGTTCATGTACACGATCTACAAAGTAACCTAGCAAATATTCAATTCAGGGACCCTAGAAGATACGCTGATCACAACTTGCTGCTGAAAATACAAGAACAAGAAGATTGGAAAGAACTCGAGGGAGATATGAGTGTTGATTCTAACTCAACAAAATCTGCAGAATCAACTGATGAGAGTCTCATGCATTATCAAGTCTCTGATAGCACCCCACTTGACCTATGGGAAATAGGGGAAGTTATTGGAAGAGGCAGTTCTGGAATTGTTCATCATGGCGTCAACAGGGAAACTGGAGAATCATGTGCAATAAAGGAAATGCGTTACATTGGCAATCCTGGAGTTGCGGAATCGCTACATCGGGAAGTTCAAGTTTTCAGCCGGCTGGAACATCAAAACATTGTAAAGTATTATGGCAGTGAAATAGAGGGAAGCCGGGGACGCATATACATGGAACTTGTTCAGCCCGGTTCACTGAAGAAATATATCACTTATCGAGGTGCTTTACAAGAATCATTAGTTCGAGATTTCACCGCACAGATTCTCTCTGGATTGGTTTACTTGCACAGACGAAGAGTAGTCCACAGGGATATTAAACCGCATAATATACTTGTGGATTCTAAGAACAATGTAAAGCTTGCTGACTTTGCTTTGGCTGAGCAGCTAGCAGAATCTGCTGGCCAGCACTCCACGCCGGGAACTCTATATTATGCAGCCCCAGAGGTTCTTAAAAGAATAGAATATAAGAGCTGGCTTGAAGCTTATGCTGCTGATATATGGAGTTTGGGCTGTGTAATCATTGAAATGTTCTCAGGGGAACATCCTTGGCATGATCTTGAACCGGTGCAGGTCTTCTTTAATGTTCATTTTAAAGAGCAGCATCCGCCCATACCAGAAGAGTTAAGCCAAGAGGGTAAAGATTTTCTTCAACTCTGCTTCCAAAAAACTCCGGCCGATCGGCCCTCTGCTGCAGCATTACTAGACCATCCCTTTGTGAAAGCACAAACAACTTAG 2502 0.3845 MCFSIWKGTNKIEAITLDLPENIEVQWSGEAFVKMKSLKMLVIKKACFSEYPKYLPKSLRWLEWKGYSFKFLPSLCATELVYLDLSFSFCELLQPFDKKFRNLSSMKLRNCQSLLQIPDLSGASNLRELWLDGCTNLIGIHESVGCLEKLRELSAMRCEKLKILPSCLRLTSLRHLNLFGCSSLQTFPEVSVMMVEMQTLDLDKTAITELPSSICNLVGLEILHMEECPNLMQLPASICTLPNLWKLTANSCERMSDIKMCEGGDKASSDLSATLLKMEQLCFSNCNLSDDSLTFCLSYFSNMIYLDLSLNNFMSLPECIKEYHNLKYLFLDHCDQLQHIREMPPNLEKFSAICCTSLTKLSKSKVLKQVFNFQSGKRNFILPGNKFPERLHYYSRGSFVSFWVRNVFPMAFLWILVKDDQDYVYNFKLSVHFNNTKLDISSEWLLLSTIKTDHIFICDMRSIIHSTELPLQNKWNQVKVSLESKTPEIKGEKGICFGVHVHDLQSNLANIQFRDPRRYADHNLLLKIQEQEDWKELEGDMSVDSNSTKSAESTDESLMHYQVSDSTPLDLWEIGEVIGRGSSGIVHHGVNRETGESCAIKEMRYIGNPGVAESLHREVQVFSRLEHQNIVKYYGSEIEGSRGRIYMELVQPGSLKKYITYRGALQESLVRDFTAQILSGLVYLHRRRVVHRDIKPHNILVDSKNNVKLADFALAEQLAESAGQHSTPGTLYYAAPEVLKRIEYKSWLEAYAADIWSLGCVIIEMFSGEHPWHDLEPVQVFFNVHFKEQHPPIPEELSQEGKDFLQLCFQKTPADRPSAAALLDHPFVKAQTT 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4614g00008 833 Gene3D Ribonuclease Inhibitor 10 193 IPR032675 -
Pral4614g00008 833 Gene3D Ribonuclease Inhibitor 194 375 IPR032675 -
Pral4614g00008 833 ProSitePatterns Protein kinases ATP-binding region signature. 578 601 IPR017441 GO:0005524
Pral4614g00008 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672|GO:0006468
Pral4614g00008 833 ProSiteProfiles Protein kinase domain profile. 572 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4614g00008 833 CDD STKc_MAPKKK 572 828 - -
Pral4614g00008 833 Pfam Protein kinase domain 573 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4614g00008 833 SMART serkin_6 572 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4614g00008 833 SUPERFAMILY Protein kinase-like (PK-like) 557 829 IPR011009 -
Pral4614g00008 833 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 464 831 - -
Pral4614g00008 833 SUPERFAMILY L domain-like 15 364 - -
Pral4614g00008 833 Gene3D Transferase(Phosphotransferase) domain 1 657 833 - -
Pral4614g00008 833 Gene3D Phosphorylase Kinase; domain 1 566 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4614g00008 Pral-Chr4614 221843 228415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4614g00008 565 829 MAP Kinase Kinase Kinase AT5G66850 47.985 2.93e-72 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral4614g00008 Pkinase 4.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4614g00008 - - pcin:129311747 642.499