Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4614g00001 ATGGAACATCGAGCACCATCTTTTTCTATCACTTACAAATGGACTTATGATGTGTTCCTTAGTTTTTATGGTGATGATACTCGCTTAGGCTTCACCAGCTATCTCTACCATGCTCTGCATCAAAGTGGAATTCATGCCTTTCTCGATGATGAATTCATTAGGATCGGAGAAAATATCACACCCGCGCTTTTCGAAGCTATACAAGAATCAAGAATAGCCATCATAGTTTTCTCAGAAAACTATGCAAACTCAACATTTTGTTTGCAAGAACTTGAAAAGATTCTGGAGTGCTTCAAGGAAGAGAGTCGGTTGATATATCCAGTATTTTATTATGTGGATCCATCAGAACTACGACGTCCCAGAGGAAGCTATGCAAAAGCATTGGCTCGACTGGAGAAAAGATTCAAAGACAATAGGCTCCAGGTGGAAAAATGGCGGCTTGCTTTATCTCAAGCTGCTGAACTCAAAGGCTGTCATCTCAAACCCAAGATTGCAAATGAACAAGAGTGTATTACAAGGATCACTGATGAAATTGCTGCTAAGATTAACCAGCAGCGTTTGCACATTACAGATTATCAGGTTGGGATTGTGCCTCGAGCCAAGGAAGTTATCTCTTGTTTAGATCTTTGGTCTACTGAAGAAAAAAAAATGATAGGAATTTGGGGAGCTGGGGGAATAGGTAAATCCACTATTGCAAGAGCTATATATAATTCCATTGCTGATCATTTTGAAGGCTTATGTTTTCTTTCTAATGTAAGAAAACATTCTCAAAATCCAACTGATTTGTCACATCTTCAAGAGACATTATTAAGTACATTAGTTAAGGAGAAAGATCTCAAATTGGGTGACTATCATGAAGGAATACCAATAATAGAACATAGGCTTAGTAAGAAGAAGATTCTTTTGATTCTTGACGATGTTGACAAATTAGAACAATTAAAAGCACTTGCTGGAAGTTGTAACTGGTTTGGTTGTGGAAGTAGAATCATCATCACAACCAGAAATAAGAAATTATTAGTCAGTCATGGTGTTACAAGCATTTATGATGTCAAGGAATTAGATGATAAGGAATCTCTTAAGTTGCTTAGTTGGCATGCCTTTGAAAAAGAAAACGTGGATTCCAACTATATGGAGGTTTGCAATCATGCCATAAATTATTCGTGCGGTTTTCCATTAGTTTTAGAAGTGATTGGTTCTAACTTGCGCGGTGAAGGAGTTAATATCTGGAGGTCTGCATTGGATCAGTTTAAAAGCATTCCGCATGAAAGTATTTTGGGTGCCTTCAAATTAAGCTATGACACTTTAGGAGAAGTGGAGAAACAAGTTTTCCTTGACTTGGCTTGTTTTTTCAATTATGAGAAATTAGCACTTGTCAATGATATGTTGCTATGTGTTCGTGGAATCCGATTAGAATATGCTATTAAAGTGTTGACTGATAAATCCCTAATAAAGATTGAGCGAGATTGTGTAATAATGCATGACTTGATAGAAGGTATAGGTAAAGAGATTGTTCGACAAGAATCATCATATGAGCCTGGTGGACGTAGTAGACTATGGTTCTACAAAGACGTTCTTCATGTCTTACAACAAGACACGGGGACTCACCAAATTGAAGCCATAGTTCTAGACTTACCTGAAAGCATAGAAGTACAATGGAGTGGAGAGGCATTCATGAAAATGAAAAATCTAAAAATGCTTGTGATAAGAAAAGCATGCTTCTCTGAATGTCCCAAATATCTGCCAAGGAGTTTGAAGTGGTTAGAATGGAAGGGGTATTCTTTCAAATTTTTACCATCTTTGTGCCCAACTGAGCTTGTCTATCTTGACTTGTCCTTTAGTTATTGTGAATTGCTCCAACCATTTGACAAGCAAATACCTGACTTGTCTGGAGCTTCTAATTTAAGAGAATTGTGGCTTGATGGTTGCACAAATTTAATTGGAATTCATGATTCAGTGGGGTGTTTAAATCAATTGAGAGAATTGAGCGCTATGCGATGCAAAAATTTGAAGATTTTGCCAACTTGCCTTAAGTTGACCTTTCTTAAGCATCTCAACCTCTTTGGTGTTCAAGTCTTCAGAGATTTCCAGAAGTATTAG 2097 0.3729 MEHRAPSFSITYKWTYDVFLSFYGDDTRLGFTSYLYHALHQSGIHAFLDDEFIRIGENITPALFEAIQESRIAIIVFSENYANSTFCLQELEKILECFKEESRLIYPVFYYVDPSELRRPRGSYAKALARLEKRFKDNRLQVEKWRLALSQAAELKGCHLKPKIANEQECITRITDEIAAKINQQRLHITDYQVGIVPRAKEVISCLDLWSTEEKKMIGIWGAGGIGKSTIARAIYNSIADHFEGLCFLSNVRKHSQNPTDLSHLQETLLSTLVKEKDLKLGDYHEGIPIIEHRLSKKKILLILDDVDKLEQLKALAGSCNWFGCGSRIIITTRNKKLLVSHGVTSIYDVKELDDKESLKLLSWHAFEKENVDSNYMEVCNHAINYSCGFPLVLEVIGSNLRGEGVNIWRSALDQFKSIPHESILGAFKLSYDTLGEVEKQVFLDLACFFNYEKLALVNDMLLCVRGIRLEYAIKVLTDKSLIKIERDCVIMHDLIEGIGKEIVRQESSYEPGGRSRLWFYKDVLHVLQQDTGTHQIEAIVLDLPESIEVQWSGEAFMKMKNLKMLVIRKACFSECPKYLPRSLKWLEWKGYSFKFLPSLCPTELVYLDLSFSYCELLQPFDKQIPDLSGASNLRELWLDGCTNLIGIHDSVGCLNQLRELSAMRCKNLKILPTCLKLTFLKHLNLFGVQVFRDFQKY 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4614g00001 698 PRINTS Disease resistance protein signature 629 645 - -
Pral4614g00001 698 PRINTS Disease resistance protein signature 217 232 - -
Pral4614g00001 698 PRINTS Disease resistance protein signature 387 401 - -
Pral4614g00001 698 PRINTS Disease resistance protein signature 294 308 - -
Pral4614g00001 698 Gene3D - 9 182 IPR035897 -
Pral4614g00001 698 SMART till_3 15 155 IPR000157 GO:0007165
Pral4614g00001 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 446 IPR027417 -
Pral4614g00001 698 Gene3D - 183 345 IPR027417 -
Pral4614g00001 698 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 157 IPR035897 -
Pral4614g00001 698 Pfam TIR domain 16 187 IPR000157 GO:0007165
Pral4614g00001 698 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 679 IPR044974 GO:0006952
Pral4614g00001 698 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral4614g00001 698 Gene3D - 352 436 IPR042197 -
Pral4614g00001 698 Pfam NB-ARC domain 212 422 IPR002182 GO:0043531
Pral4614g00001 698 SUPERFAMILY L domain-like 539 690 - -
Pral4614g00001 698 Gene3D Ribonuclease Inhibitor 540 697 IPR032675 -
Pral4614g00001 698 SUPERFAMILY "Winged helix" DNA-binding domain 424 529 IPR036390 -
Pral4614g00001 698 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4614g00001 Pral-Chr4614 6246 9094 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4614g00001 6 695 WRKY Transcription Factor Family AT4G12020 30.041 1.69e-67 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4614g00001 - - pcin:129289024 962.214