Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4613g00020 ATGCAACAAAAGATAAAGCTATTGGAAGACCATATTCAAAAGTCAGATGAAGAGCTGCAGTCTTATGTTCAGTTTTATCATGATTCAGTGATGGAATTTCAAGACACAGTTAATACTCTAAAAGGAGAAAGCAAGAGAAGAGCACTACATGAACCAGTGGAAGATATGCCATTGGAATTTTGGAGTCTTGATGGTTGGTCACTTGAAAAGAAAATTTCCACAGATGATGCTATGTTATTAAGAGAAAAAGTGTGGAAGAGAGATAGGGGTATTCGGGATACCTACATCACTTGTAAAGAGCAGAGTGAGCAGGAGGTTATCTCTGCATTTCTTAGGCTGACATTTTCTTCAACAAGTTTTTATGGTGATGATACTCGCTTAGGCTTCACCAGCTATCTCTACCATGCTCTGCATCAAAGTGGAATTCATGCCTTTCTCGATGATGAATTCATTAGGATCGGAGAAAATATCACACCCGCGCTTTTCGAAGCTATACAAGAATCAAGAATAGCCATCATAGTTTTCTCAGAAAACTATGCAAACTCAACATTTTGTTTGCAAGAACTTGAAAAGATTCTGGAGTGCTTTAAGGAAGAGAGTCGGTTGATATATGCAGTATTTTATTATGTGGATCCATCAGAACTACGACGTCCCAGAGGAAGCTATGCAAAAGCATTGGCTCGATTGGAGAAAAGATTCAAAGACAACAGGCTCAAGGTGGAAAAATGGAGGCTCGCTCTGTCTCAAGCTGCTGAACTCAAAGGCTGTCATCTCAAACCCAAGATTGCAAATGAACAAGAGTGTATTACAAGGATCACGAAAGAAATTGCTGCTAAGATTAACCAGCAGCGTTTACATATTACAGATTATCAAGTTGGACTTGTGCCCCGAGCCAAGGAAGTTATCTCTTGTTTAGATCTTTGGTCTACTGAAGAAAAAAAAATGATAGGAATTTGGGGAGCTGGTGGAATAGGTAAATCCACAATTGCAAGAGCTGTATATAATTCCATTGCTGATAATTTTGAAGGCTCATGTTTTCTTTCTAATGTAAGAAAACATTCTGAAAATCCAACTGGTTTGTCACATCTTCAAGAGACATTATTACGTACATTAGTTAAGGAGAAAGATCTCAGATTGGGTGACTATCATGAAGGAATACCAATAATAGAACATAGGCTTAGTAAGAGGAAGATTCTTTTGATTCTTGATGATGTTGACAAATCAGAGCAATTAAAAGCACTTGCTGGTAGTTCTAACTGGTTTGGTTGTGGAAGTAGAATCATCATCACAACCAGGAATAAGAAATTATTAGTAAGTCATGGTGTTACAAGCATTTATGATGTCAAGGAATTAGATGATAAGGAATCTCTTAAGTTGCTTAGTTGGCACGCCTTTGAAAAAGAAAACATGGATTCCAACTACATAGAGGCTTGCAATCGTGCCATAAATTATTCATGTGGTTTTCCATTAGTTTTAGAAGTGATTGGTTCTAACTTGCGTGGTGAAGGAGTTAATCTTTGGAATTCTGCATTGGATCAATTCAAAAGCATTCCGCATGAAAGTATTTTGGGTGCCTTCAAATTAAGCTATGATACTTTAGAGGAAGTGGAGAAACAAGTTTTCCTTGACTTGGCTTGTTTTTTCAATGGTGAGAAATTAGCACTTGTCAATGATATGTTGCAAAGTGTTCGTGGAATCCGATTAGAATATGCTATTAAAGTGTTGATTGATAAATCCCTAATAAAGATTGAACGAGATTGTGTAACAATACATGACTTGATAGAAGATACAGGTAAAGAGATCGTTCGACAAGAATCACCATATGAGCCTGGTGGACGTAGTAGACTATGGTTCTACAAAGACATTCTTCATGTCTTGCAACAAGACACGGGGACTCACCAAATTGAGGCCATAGTTCTAGACTTACCTGAAATTATAGAAATACAATGGAGTGGAGAGGCATTCACGAAAATGAAAAATCTAAAAATGCTTGTGATAAGAAAAGCATGCTTCTCTGAGTGTCCCAAATTTATTGTGAATTGCTCCAACCATTTGACAAGGCATTTCACAATATAA 2076 0.3724 MQQKIKLLEDHIQKSDEELQSYVQFYHDSVMEFQDTVNTLKGESKRRALHEPVEDMPLEFWSLDGWSLEKKISTDDAMLLREKVWKRDRGIRDTYITCKEQSEQEVISAFLRLTFSSTSFYGDDTRLGFTSYLYHALHQSGIHAFLDDEFIRIGENITPALFEAIQESRIAIIVFSENYANSTFCLQELEKILECFKEESRLIYAVFYYVDPSELRRPRGSYAKALARLEKRFKDNRLKVEKWRLALSQAAELKGCHLKPKIANEQECITRITKEIAAKINQQRLHITDYQVGLVPRAKEVISCLDLWSTEEKKMIGIWGAGGIGKSTIARAVYNSIADNFEGSCFLSNVRKHSENPTGLSHLQETLLRTLVKEKDLRLGDYHEGIPIIEHRLSKRKILLILDDVDKSEQLKALAGSSNWFGCGSRIIITTRNKKLLVSHGVTSIYDVKELDDKESLKLLSWHAFEKENMDSNYIEACNRAINYSCGFPLVLEVIGSNLRGEGVNLWNSALDQFKSIPHESILGAFKLSYDTLEEVEKQVFLDLACFFNGEKLALVNDMLQSVRGIRLEYAIKVLIDKSLIKIERDCVTIHDLIEDTGKEIVRQESPYEPGGRSRLWFYKDILHVLQQDTGTHQIEAIVLDLPEIIEIQWSGEAFTKMKNLKMLVIRKACFSECPKFIVNCSNHLTRHFTI 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4613g00020 691 Gene3D - 278 443 IPR027417 -
Pral4613g00020 691 SUPERFAMILY Toll/Interleukin receptor TIR domain 119 255 IPR035897 -
Pral4613g00020 691 Gene3D - 118 277 IPR035897 -
Pral4613g00020 691 SMART till_3 106 253 IPR000157 GO:0007165
Pral4613g00020 691 Gene3D - 450 534 IPR042197 -
Pral4613g00020 691 Pfam NB-ARC domain 310 523 IPR002182 GO:0043531
Pral4613g00020 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 286 544 IPR027417 -
Pral4613g00020 691 SUPERFAMILY "Winged helix" DNA-binding domain 522 627 IPR036390 -
Pral4613g00020 691 Pfam TIR domain 115 285 IPR000157 GO:0007165
Pral4613g00020 691 ProSiteProfiles TIR domain profile. 112 280 IPR000157 GO:0007165
Pral4613g00020 691 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 119 680 IPR044974 GO:0006952
Pral4613g00020 691 PRINTS Disease resistance protein signature 392 406 - -
Pral4613g00020 691 PRINTS Disease resistance protein signature 485 499 - -
Pral4613g00020 691 PRINTS Disease resistance protein signature 315 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4613g00020 Pral-Chr4613 287345 298839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4613g00020 104 664 WRKY Transcription Factor Family AT4G12020 30.465 2.07e-56 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4613g00020 - - pcin:129289024 788.489