Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4613g00009 ATGGATTTGACCATTTCTTTAACGCTCATAGAAGGTTTCTTGATCTTATTGGCCATAGCAACTAATAAAGCTATCAGGTTTATCTCTCCTTCATCACTTCATGTTAACCATCCTGCTGCTGTTAATGAGAGTTTCGAAGGTGAAGCTGTTTCAGTTTCAAAGGTTTCTTCTCCTCCTACTCCTCATATTGTTGCTACTCCTCCTACTACAAAGTATGATGTATTTCTTAGCTTTAGAGGGGAAGATACTCGTCACAATTTTGCAAGTTATCTCTATGAAGCACTTTGTAAAGCAAACATTCAAACTTTTATGGATCACAAACTCCATAAAGGAGAAGATATCTCACCGGTTCTTCTAAGGACCATAGAGGAATCAGAGATATCTGTGATTATTTTCTCTACAGATTATGCTTCTTCAACTTGGTGTCTGGATGAGCTTGTTTACATATTAGAATGTAAGAAAAAATTTGGAAGGATTGTGATGTCTATTTTCTACAAAATTGATCCATCAAATGTTCGCAAACAAAGTGGAAGATTTGGAGATGGCTTTGCTAAACTGAAGCAAAGATTTAAAGACAACCCAAACAAATTACGGAAGTGGAAAAATGCTTTGATCCAATCCACAAGCCTCGCTAGATGGGATTCCAAGAATTTCAGGCCAGAGATCAAACTCGTTAAAAAAATTGTCAAGGATATATTGAGCAAATTGAACTACTGTACATCGTCATCATGTCATCTTGAAGGACTTGTGGGCATTAATCATCAAATTGAGAAAATTGAAGAACTATTGATTGATGCTCGGATTGTGGGAATATGGGGCATGGGTGGTATAGGTAAGACTACACTTGCCAAGGCCGTGTTTCACAATTTGAAAGCACAATTTGAAGCTTCCTCCTTTGTTGGAAATGTAAGAGAACAACTAGCAAGAATTGGTCTGAACAAATTAATGGAAGAATGCCTTAAAGAATTATTAAAAGATGAGGGCCTTCACATCTACAATATGAAATCCACTTTTGTGAAACGTAGGCTCCAACAAAAAAAGATTCTTTTGATACTTGATGATGTGGACAATTTATTAACAGCTGAAGATTTAACCAAATTGTGTGATTGGTTTGGAGAAGGAAGTAGAATTGTTGTTACATCAAGAGACATGCATGTTCTCAAGAATGCTTCTGCATCTGCAACATATCATGTTCAGAAATTAGAGTCCGGTCATGCTCTAAATCTCTTCAGTTTGAAAGCATTTAAGCAAAATGATCCATTTAAAAGTTATTTCGAGTTATCAAAGTTGGTTGTTGATTATTGTCAGGGAAACCCATTAGCTCTTGTAGTGTTGGGTTGCTTTCTGTACAATAGAACAAAACAACAGTGGGAAAGTGCATTGGAAAAACTAAAACAAGCTCCACACAAGGATATTTTTACTGTGCTCAAATTGAGTTTTGATGGACTTGATGAGAAGCAAAAGAATGTGTTTCTTGACTTGGTACATTTATCGAGCGAAACAAGTTATAAGATTTCTTTAAACTTTATTAGAGGCTTCTATGACTTTTCTGTATATATTGAGATAAGTGTCCTCAAAGAAAGATCTCTTATTTCCATGGATCAATTTGGTGGAATTGAGATGCATGATCTTATAAGAGAAATGGGTCAAGAAATTTGTAGACAACAATTGATCATTGATCCTGAAAGACCTATTCGGCTATGGAAACACAACGATATTTATCATTTGTTCATCAATAAAAAGGGGAGTGGGACAATTCGATGCATATCTTTGGATATGTGCAAGACAAAAGAGATAACATTGCAGGCTAATACCTTCAGAAAGATGAATGCCTTAAAATTTCTCAAGTTTTACAAGTCTGATTTTGAAAAGCCTTCAAAAGTGTATGTTTATGAAGGTCTTGATAATCTCCCTGAAGAACTAAGGTTTTTCTTTTGGGAAGATTATCCTCTGCCATCTGTACCACTAAGCTTTTGTGCAGAGAATCTCATGGAACTTGAAATGCCTCATAATGAACTCCAACAACTTTGGGATGCAGATCAGCATTTCCCGAATTTAGGAGTGATGAATCTGACTGCGTCAAAAGATCTGGTTGAGCTTCCAAATCTCTCTCAAGCCCCCAATATGAGTATGGTATATCTTGATGAATGTGTGAACTTGACTCAAATTTATTCTTCAAGTAGCTTGAGCAAGCTTTCCCATTTATCCATACGAGATTGCAAAGACCTGAGACATATAAGCATTGGTGGCAATATCAAGGAGACAAGTTCTGGGTTAGTAGCTGTCTACAATTTTCTGGATCTTGGCAACTCGTTGTTCCATAAATTGATTGTGAAGCTCTTTGTCTCAAACGATGGCAATATTTTCTCTGGTTTTCGGGTTAAACTTGTGTCAGTATCATTGTCAGAGATATTATCAACAGATCAGTACATGAACAATACTGAGAGTTCAAAGTTGAAATTGTCATCTTTGCTTCCATTTGTTACTTCACTTCGCTGGTTAGATCTTATGGAGTTTGGCAATTTCAGCGAACGTTTCAACTTTCTTTCTGAACATGAAGAGCTTAAGAATATCCATGCCAAAGATGTAGTCAATGAACTCAGAGCGATGGTGAGAAAGCCATTGGAGGTTGAAGAAAAGAGAATAACAGTAGAGGTGATCACAGATTACACTTCTTATTATCATGGAAAAAGGAAGCCATTGGAGATCGAAGAAGAGATAATGACAGAAATAATGGAATGCTGTTGTAGTACAAGCAATAATAGATTAATCAGAGCTCCTAATAGCATCACACGCTGGCCATTACTGACACAGGTGACATTGCAGAAAAGTGAAATTACTGGGTGTGAAGTTTGGGACATTCCTGGGATTTCAATGTTGAAATCACTTGCAGAATCTGGTTGTTGCAGCAGGAATAAACCTGTCATAGATATAAGAATTTCACTGGATAAAGAAGCAACGATATGGGGTGGCAACAATGATATTGTAGCAGAAACAAAATGGGACATGCCTAATTTTAGCATCGATATATGGCAAGAATTGGCTGGAGATTTCTTTGTTCATTTTCCCATTCGCTTAGATCACGACTCCATTTCGTTTCTTTTATGGTTTTCAAGAAGAACTATCAGCAAGTGA 3135 0.3662 MDLTISLTLIEGFLILLAIATNKAIRFISPSSLHVNHPAAVNESFEGEAVSVSKVSSPPTPHIVATPPTTKYDVFLSFRGEDTRHNFASYLYEALCKANIQTFMDHKLHKGEDISPVLLRTIEESEISVIIFSTDYASSTWCLDELVYILECKKKFGRIVMSIFYKIDPSNVRKQSGRFGDGFAKLKQRFKDNPNKLRKWKNALIQSTSLARWDSKNFRPEIKLVKKIVKDILSKLNYCTSSSCHLEGLVGINHQIEKIEELLIDARIVGIWGMGGIGKTTLAKAVFHNLKAQFEASSFVGNVREQLARIGLNKLMEECLKELLKDEGLHIYNMKSTFVKRRLQQKKILLILDDVDNLLTAEDLTKLCDWFGEGSRIVVTSRDMHVLKNASASATYHVQKLESGHALNLFSLKAFKQNDPFKSYFELSKLVVDYCQGNPLALVVLGCFLYNRTKQQWESALEKLKQAPHKDIFTVLKLSFDGLDEKQKNVFLDLVHLSSETSYKISLNFIRGFYDFSVYIEISVLKERSLISMDQFGGIEMHDLIREMGQEICRQQLIIDPERPIRLWKHNDIYHLFINKKGSGTIRCISLDMCKTKEITLQANTFRKMNALKFLKFYKSDFEKPSKVYVYEGLDNLPEELRFFFWEDYPLPSVPLSFCAENLMELEMPHNELQQLWDADQHFPNLGVMNLTASKDLVELPNLSQAPNMSMVYLDECVNLTQIYSSSSLSKLSHLSIRDCKDLRHISIGGNIKETSSGLVAVYNFLDLGNSLFHKLIVKLFVSNDGNIFSGFRVKLVSVSLSEILSTDQYMNNTESSKLKLSSLLPFVTSLRWLDLMEFGNFSERFNFLSEHEELKNIHAKDVVNELRAMVRKPLEVEEKRITVEVITDYTSYYHGKRKPLEIEEEIMTEIMECCCSTSNNRLIRAPNSITRWPLLTQVTLQKSEITGCEVWDIPGISMLKSLAESGCCSRNKPVIDIRISLDKEATIWGGNNDIVAETKWDMPNFSIDIWQELAGDFFVHFPIRLDHDSISFLLWFSRRTISK 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4613g00009 1044 Pfam NB-ARC domain 255 470 IPR002182 GO:0043531
Pral4613g00009 1044 Pfam TIR domain 71 252 IPR000157 GO:0007165
Pral4613g00009 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 494 IPR027417 -
Pral4613g00009 1044 SUPERFAMILY Toll/Interleukin receptor TIR domain 68 208 IPR035897 -
Pral4613g00009 1044 Gene3D - 243 398 IPR027417 -
Pral4613g00009 1044 PRINTS Disease resistance protein signature 268 283 - -
Pral4613g00009 1044 PRINTS Disease resistance protein signature 342 356 - -
Pral4613g00009 1044 PRINTS Disease resistance protein signature 435 449 - -
Pral4613g00009 1044 PRINTS Disease resistance protein signature 727 743 - -
Pral4613g00009 1044 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 72 824 IPR044974 GO:0006952
Pral4613g00009 1044 Gene3D - 68 242 IPR035897 -
Pral4613g00009 1044 ProSiteProfiles TIR domain profile. 70 236 IPR000157 GO:0007165
Pral4613g00009 1044 SMART till_3 71 210 IPR000157 GO:0007165
Pral4613g00009 1044 Gene3D Ribonuclease Inhibitor 580 757 IPR032675 -
Pral4613g00009 1044 SUPERFAMILY L domain-like 585 963 - -
Pral4613g00009 1044 FunFam Disease resistance protein (TIR-NBS-LRR class) 68 238 - -
Pral4613g00009 1044 SUPERFAMILY "Winged helix" DNA-binding domain 471 576 IPR036390 -
Pral4613g00009 1044 Gene3D - 400 484 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4613g00009 Pral-Chr4613 203218 207047 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4613g00009 72 746 WRKY Transcription Factor Family AT4G12020 29.437 4.29e-74 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4613g00009 - - pcin:129286024 1020.38