Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4613g00008 ATGGACGAGCTTGTTCATATTATGAGCTGTAGGGATAAATACCAAAGAGTTGTCATCCCTATTTTCTATGACATAGATCCATCAAATGTTCGCAAACAAAATGGAAGTTTTGGAGATGGATTTGCTAAGATTAAGCAGAGATTTAGGGGCAACCAAGAAAAAGTGCAAAATTGGACAAATGCTTTGATCCAATCAACAAATCTCTCTGGGTGGGATTCAAAGAATATCAGGCCTGAATCCAAACTTATTAAGAAGATTGTCAAAGATATTTTGAGCAAATTGAATGGCAAGTCGTCCTTTCATTTTGAAGGATTAGTTGGGATTGATCATCATATTCAGAAGATTGAAGAGCTATTGGGTAAAGCTCGCATTGTGGGAATATGGGGTATGGGTGGTATAGGTAAGAGTACTCTTGCTAGAGTTGTATTCCACGAGTTGAAAGCACAGTTTGAAGCTTTCTCCTTTGTGGAAGATGTAAGGGAACAACTAGCAATAATTGGGTTTGACAGGTTACAAAAAGAATGTCTCAAAGAATTAATAAAAGATAAGGACATTAATGTCTTTGATATAGAATCCTCTTTTGTGAGAAGTAGGCTTCAACGCAGAAAAGTTCTTCTGATACTTGATGATGTGGACAATTCACTACCGGCTGAAGATTTAACTAAAATGTATCGTTGGTTTGGAAAAGGAAGTTGA 696 0.3664 MDELVHIMSCRDKYQRVVIPIFYDIDPSNVRKQNGSFGDGFAKIKQRFRGNQEKVQNWTNALIQSTNLSGWDSKNIRPESKLIKKIVKDILSKLNGKSSFHFEGLVGIDHHIQKIEELLGKARIVGIWGMGGIGKSTLARVVFHELKAQFEAFSFVEDVREQLAIIGFDRLQKECLKELIKDKDINVFDIESSFVRSRLQRRKVLLILDDVDNSLPAEDLTKMYRWFGKGS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4613g00008 231 PRINTS Disease resistance protein signature 124 139 - -
Pral4613g00008 231 PRINTS Disease resistance protein signature 198 212 - -
Pral4613g00008 231 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 231 IPR044974 GO:0006952
Pral4613g00008 231 Pfam NB-ARC domain 115 213 IPR002182 GO:0043531
Pral4613g00008 231 Gene3D - 102 231 IPR027417 -
Pral4613g00008 231 ProSiteProfiles TIR domain profile. 1 94 IPR000157 GO:0007165
Pral4613g00008 231 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 71 IPR035897 -
Pral4613g00008 231 Pfam TIR domain 2 106 IPR000157 GO:0007165
Pral4613g00008 231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 230 IPR027417 -
Pral4613g00008 231 Gene3D - 1 99 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4613g00008 Pral-Chr4613 199109 200986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4613g00008 4 231 WRKY Transcription Factor Family AT4G12020 30.769 1.67e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4613g00008 - - pcin:129286024 343.199