Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4613g00006 ATGGACAAGACCACTCTTACTAGAGCCGTATTTGACAGGCTGAAAGCTGAATTTGGAGCTTTCTGTTTTGTTAAAGATGTGAGACAAAAACTAACAAGGAATGGATCGGATGAGTTACTGGAAACATGCCTCAAAGAATTATTAAAAGATGAGGGCATTAACACTTACAATTTAAGATCCACTTTTGTAAGAAGGAGGCTCCACCATAAAAAAATTCTTCTCGTACTTGATGATGTGGACAATTTTATAACAGCTGAAGGTTTAATCAAAGCAAGTGCATGGTTTGGGGAAGGAAGTAGACTTATTATCACATCAAGAGACATTCAAATGCTTAACAATACTTCTGCATCCACAACATATCGTGTTCTAAATGGGATCCCCGCCATGCCCTTCATCTCTTTAGTTTAA 408 0.375 MDKTTLTRAVFDRLKAEFGAFCFVKDVRQKLTRNGSDELLETCLKELLKDEGINTYNLRSTFVRRRLHHKKILLVLDDVDNFITAEGLIKASAWFGEGSRLIITSRDIQMLNNTSASTTYRVLNGIPAMPFISLV 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4613g00006 135 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 112 IPR044974 GO:0006952
Pral4613g00006 135 Pfam NB-ARC domain 3 118 IPR002182 GO:0043531
Pral4613g00006 135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 120 IPR027417 -
Pral4613g00006 135 Gene3D - 1 120 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4613g00006 Pral-Chr4613 174696 175103 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4613g00006 3 134 WRKY Transcription Factor Family AT5G45050 35.556 9.37e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4613g00006 - - pcin:129286786 151.754