Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4613g00002 ATGAAGCTAGAAACGGCTATCACAACCATTGCTCCAGTGTTCCAAAAAGTTTTATTGATCGTATTGGGAGTATTAATTTCCAAAGCTATCAAACTCATCTCTCATTGGCGTAATGGTAACCAACCTGCTGCTATTGATGCTAGTTCTGAAGATGATGTTGTTTTGACTCATACGGATTCTCCTCCAGCTACCAAGTATGATGTGTTTCTTAGCTTTAGAGGAGAAGACACTCGCCACAATTTTGGAAGTTATCTTTACAAAGGACTTCAAAATGCAAGCATTCATACTTTTATGGATCACAAACTCTGCAAAGGAGAATTGATCTCACCAGTTCTTCTAAAAACAATAGAGGAATCAAAAATATCTGTGATTGTTTTCTCTGAGAATTATGCTTCTTCAACTTGGTGTTTGGATGAGCTTGTTCACATATTAGAATGCAAGCGTAAATTTGGAAGGGTTGTGATACCTGTTTTCTATAACGTAGATCCTTCAAGCATACGCAAACAAAATGGGAATTTTGGAAAAGGATTTGATATACTGAAGCAAAGATTTAAAGACAACCAACAAAAATTGCAAAAGTGGAGAAATGCTATAATCCAATCTACAAGTCTATCTGGATGGGATTCCAATGTTATCAGACCTGAATTCAAACTTGTTGAAGAGATTGTCAAGGACATTTTGAGCAAATTGAATCGCAAGTCATCCATTTATGTGGAAGGATTAGTTGGAATCGATCATCAAATTCGGAGAGTTGAAGAGCTAATAAGTGAAGCTCGCATTGTGGGAATATGGGGTATGGGTGGTATAGGCAAGACCACTCTCGCTAGAGCCGTATTTGACAAGTTGAAAGCACACTTTGAAGCTTTCTGCTTCATTAAAAATGTCAGACAAAAGCTAGCAGAAAGAAATGGATTGGATGAATTGCAAGAAAAATGCCTTAAAGAATTGTTAAAAGATGATGATATTAACGCTTACGATTTAAGATCTGATTTTGTGAGAAAAAGGCTTCAGTGTAAGAAAATTCTTCTAATACTTGATGATGTGGACAATTCTATAGCAATTGAAGATTTAAAGAAAGCATGCGATTGGTTTGGGGAAGGAAGTAGAGTTATTATCACATCAAGAGATAGGCATGTGCTTGAGGATGATTCTGTCTCTGCAAGTGCAACATATCATGTTCTGAAATTGGATCCCCATCATGCCCTTCATCTCTTTAGTTTGAATGCTTTCAACCAAAATGAGCCATTGAAATGCTATTTGGAGTTATCGAAGTGGGTAGTGGATTATTGTCAAGGAAATCCATTAGCTCTAAAAGTACTGGGTCGCTTTCTTCATGGCAGAGGCAAAGAAGAGTGGGAAAGTGCTTTGGCGAAACTAAATCAAACTCCTCACAATGACATTTTTAATGTGCTAAAATTGAGTTTTGATGGACTTGATGACATACAGAAGAATGCATTTCTTGATCTTGCATTTTTGTTGAACGCAGGATGGAGGATTTCTCAGGACTATGCAAGACACTTATATGGTTCTATTGCAAATATTGAGATAAATATACTTGAAGAGAGATCCCTCATCTCAGTGGATGATGGTATTGAGATGCATGCTCTACTAATCGATATGGGTCTTGAAATTTCTAAACAACAATTAAAATCTAATCCTGACAATCCCATTCGGCTGTGGAGGCATGAGGATATTTATCGTTATTTTTCCAACAATGACAAGGGGATTGAGGCAATTCGATGCATGTCATTGGATGCAAGCCAAATAGAAAGCATGACATTGAGGGCTAGTCATTTTCAAAGGATGCGTTATTTAATGTTCCTTAATGTTTACAAGTCTGATCAGAGAAATCCTTCAAAGTTGAATATTTGTGAAGAGTTGGATTATCTTTCAAAAGAATTAAGGTTTCTTAGTTGGCAAGAATATCCACTGCCATCTGTGCCATTACAATTTTGTGCTAAGAATCTCATTGAACTTAACATGCCTCGTAGTAATATCCAACAGCTTTGGGATGGAAATCAGCAATTTCCAAATCTAAAGAAAATATATCTATGGAATTCAAAAAATCTCATGGCACTCCCAGATTTGTCTCAAGCCCCGAAGATTGAGTGGATGAGTCTTGGTGGTTGTGTGAATTTAGATCAAATCCATTCTTCAACTGTCCTGGAAAAGGATGTCAATTTATTTATAAAAGATTGTGGGCCAATGCAGATAAATATTGGGGGCAGTGTGAAAAGGAGAAGTTCATCAAGGTTAGTGATTGTGTACAATTATTTGGATGTTTCCAATTTGACATTCAATAAAGTGACAATGAAGGTGTTGGTATGTGGCAAAATGATGTGTGGTGTTGGATTTAAGCATGTGAGAATGCCACTGGGAGAGACGGCAGAATTCATGAGAGTGGGAATACAAAGTTTGGCGACTTTACTTCCATTTGTGAGGGTAGTTGAATGGTTAGAGAGTCCAATTGAGTTTGGGCATGATTTCAAGCAACATCATACCTATCATGTTTGTCGTGCATACACTGGTCTTTCAAGCTGGAATGACTTCAGGCTTTCTGTAAAGGTGAGGGGTGATGGAGAAGAGAGGGGTGTGGAAGATGATGAAGAAGAGGATGAGGATGATACAAAAATGATTAGTGAGAGTGAAAGAGAAATAAGTAGTAAAGGTAATCAAGTAGCAGAGACAACATTATTATTAAAGGAAGATGAACAAGAAGGGGCCGATGAGGATTATAGTAAGATGGACAATGCATTATTAACAACACTACTTATTCCTAACAGCATCCCTCGCTGGTCATTGTTGGTTCGACTGACATTAAAAGAGAGTGATATTATTATTGGGAATAATAATACAGGTTGTAGCATCATCCCTCAAGCTTCAATAATCCTCAAATCACTCAATGAAGATTGCAGAAGGACGATTCAGCCTCTCTTGGCAGTACAACTCTCTTCCCCAGTATCCCCTTTACCTCGTCATTCTTTCACAGTCCGTTATAACTACTTGGAGAGTACGCCACACGATCCTTCTTTTCTTTATTTCAGCAGTACATACTGGTCAAGTAATTATTTTGATAGTCATGGCTTAGTTGTTCACTTTTTGAAGGACCATTGA 3114 0.3751 MKLETAITTIAPVFQKVLLIVLGVLISKAIKLISHWRNGNQPAAIDASSEDDVVLTHTDSPPATKYDVFLSFRGEDTRHNFGSYLYKGLQNASIHTFMDHKLCKGELISPVLLKTIEESKISVIVFSENYASSTWCLDELVHILECKRKFGRVVIPVFYNVDPSSIRKQNGNFGKGFDILKQRFKDNQQKLQKWRNAIIQSTSLSGWDSNVIRPEFKLVEEIVKDILSKLNRKSSIYVEGLVGIDHQIRRVEELISEARIVGIWGMGGIGKTTLARAVFDKLKAHFEAFCFIKNVRQKLAERNGLDELQEKCLKELLKDDDINAYDLRSDFVRKRLQCKKILLILDDVDNSIAIEDLKKACDWFGEGSRVIITSRDRHVLEDDSVSASATYHVLKLDPHHALHLFSLNAFNQNEPLKCYLELSKWVVDYCQGNPLALKVLGRFLHGRGKEEWESALAKLNQTPHNDIFNVLKLSFDGLDDIQKNAFLDLAFLLNAGWRISQDYARHLYGSIANIEINILEERSLISVDDGIEMHALLIDMGLEISKQQLKSNPDNPIRLWRHEDIYRYFSNNDKGIEAIRCMSLDASQIESMTLRASHFQRMRYLMFLNVYKSDQRNPSKLNICEELDYLSKELRFLSWQEYPLPSVPLQFCAKNLIELNMPRSNIQQLWDGNQQFPNLKKIYLWNSKNLMALPDLSQAPKIEWMSLGGCVNLDQIHSSTVLEKDVNLFIKDCGPMQINIGGSVKRRSSSRLVIVYNYLDVSNLTFNKVTMKVLVCGKMMCGVGFKHVRMPLGETAEFMRVGIQSLATLLPFVRVVEWLESPIEFGHDFKQHHTYHVCRAYTGLSSWNDFRLSVKVRGDGEERGVEDDEEEDEDDTKMISESEREISSKGNQVAETTLLLKEDEQEGADEDYSKMDNALLTTLLIPNSIPRWSLLVRLTLKESDIIIGNNNTGCSIIPQASIILKSLNEDCRRTIQPLLAVQLSSPVSPLPRHSFTVRYNYLESTPHDPSFLYFSSTYWSSNYFDSHGLVVHFLKDH 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4613g00002 1037 Pfam TIR domain 65 235 IPR000157 GO:0007165
Pral4613g00002 1037 SUPERFAMILY Toll/Interleukin receptor TIR domain 60 207 IPR035897 -
Pral4613g00002 1037 SUPERFAMILY "Winged helix" DNA-binding domain 466 568 IPR036390 -
Pral4613g00002 1037 ProSiteProfiles TIR domain profile. 64 230 IPR000157 GO:0007165
Pral4613g00002 1037 Pfam NB-ARC domain 257 465 IPR002182 GO:0043531
Pral4613g00002 1037 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 66 740 IPR044974 GO:0006952
Pral4613g00002 1037 MobiDBLite consensus disorder prediction 863 878 - -
Pral4613g00002 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 489 IPR027417 -
Pral4613g00002 1037 Gene3D - 395 479 IPR042197 -
Pral4613g00002 1037 Gene3D Ribonuclease Inhibitor 562 748 IPR032675 -
Pral4613g00002 1037 Gene3D - 62 232 IPR035897 -
Pral4613g00002 1037 Gene3D - 233 387 IPR027417 -
Pral4613g00002 1037 MobiDBLite consensus disorder prediction 860 891 - -
Pral4613g00002 1037 SUPERFAMILY L domain-like 580 728 - -
Pral4613g00002 1037 Pfam Leucine Rich Repeat 655 674 IPR011713 -
Pral4613g00002 1037 FunFam Disease resistance protein (TIR-NBS-LRR class) 62 232 - -
Pral4613g00002 1037 SMART till_3 65 204 IPR000157 GO:0007165
Pral4613g00002 1037 PRINTS Disease resistance protein signature 260 275 - -
Pral4613g00002 1037 PRINTS Disease resistance protein signature 674 690 - -
Pral4613g00002 1037 PRINTS Disease resistance protein signature 430 444 - -
Pral4613g00002 1037 PRINTS Disease resistance protein signature 335 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4613g00002 Pral-Chr4613 21914 27153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4613g00002 66 710 WRKY Transcription Factor Family AT4G12020 29.474 1.01e-66 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4613g00002 - - pcin:129286024 974.156