Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4608g00003 ATGGAGGCAACCTTTACTCTAACGCTCATAGAAGCTGTATTGATTTTGCTGGCTATAGCAATTTCTAAAGCTATCACATTAATCTCTCCACTTGATCATAGTCGTAAAGATGCTGTTGATTCGATTCCCACGGTTTCTTGTCCTTCTCTTATCATTGGTGCTCCCCCTGCAATCAAGTATGACGTGTTTCTTAGCTTCAGAGGGGAAGACACTCGCCATACCTTTTCTAGTTATCTCTATGAAGCACTTGACCAAGTGGGCCTTCATACTTTTATGGATCACAAGCTCTATAAAGGAGATCATATCTCACTGATTCTTCTGAAAACAATAGAGAAATCAGAGATATCTTTGATCATTTTCTCTAAGGATTATGCTTCTTCAACATGGTGTATGGATGAGCTCGTTCACATTATGAAATGTAAAGATAAGTACGGAAGGCTTGTCGTCCCAATTTTCTACAACGTAGATCCATCAAATATTCGGAAACAGGATGGGAGATTTGGAGATGGATTTGCCAAGCTCAAGCAGAGATTTAAGCACGACCAAAAAAGAGTGCAGGATTGGAAAAATGCTTTGATCAAATCGGCAAGTCTATCTGGGTGGGATTCAGAGAATTTCAGGCCTGAATTTGAACTTGTCAAAAAGATTGTCAAAGATGTTTTGAGCAAGCTAAATCGTAGGTCATCCTTTCATGTGGATGGATTAGTTGGGATTGATCGTCAGATTCAGGAAGTTGAAGAGCTACTGAGTAATGCTCGCATTGTGGGAATATGGGGTATGGGTGGTATAGGCAAGACCACTCTTGCTAGTGCTTTATTTGACAAGTTGAAAGCTGAGTTTGAAGCTTCCTATTTTGTTAAAGATGTAAGACAACTGCTGGAAAAGAATGGGTTGGAAGAATTACAGGAAAAATGCCTTAAAGCATTATTAAAGGATGAGGATATTAACACTTATAATTTGAGATCTGATTTTGTGAGAAGGAGGCTTCACCATAAAAAAATTCTTTTCGTACTTGATGATGTGGACGATTTTATGGCAACTGAAGATTTGATCAAAGCATGTGGTTGGTTTGGGGAAGGAAGTAAAATTATTATCACATCTAGAGACATGCAAGTGCTTAAGCATGCTTCTGCATTTCTAACATATCGTGTTCCAACAATGTATCCCCATGATGCTCTTCATCTCTTTAGTTTGAAAGCTTTTAAGCAAAATCGGCCGTTCAAAAACTACTTGGACTTATCACAGCGGGCAGTGTATTACTGTCATGGAAATCCTTTAGCTCTAAAAGTGCTGGGTTGCTTTCTTCATGGCAGAGAAAAAGAAGTATGGGAAAGTGCTCTGGCAAAACTAAATCATACTCTTCACAACGGCATTTTTAAAGTGTTGAAGTTGAGCTTTGATGGACTTGATGATCATCAGAAGAATGTATTTCTTGACCTAGCATTTTTTTCGAACGAACGGTGGATTTCTCTGAACTATGCAAGAGCCTCATATGCAAATATTGACATAGATGAACTTGAAAAGAGATCCCTCATTTCAGAGGATGGACATGGTAATATTGGGATGCATGCTCTATTAGTGGAGATGGGGCTTGAAATTTCTCGGCAACAATTAATATCTAACTCTGAAAAACCCATTCGAATTTGGAGACCCCAGGATATTTATCATTTCTTCAACAATGACAAGGGGATTGGGGCAATTCGATGCATGTCATTGGATGCAAGCAAGATAAAAAGCATCGCATTGAGGGCTAGTCATTTTCAAAGGATGTATGATTTAATATTCCTTAATGTTTACAAGTCTGATCAAAGAAAGCCTTCAAAGTTGAATATTTGTGAAGAGTTGGTTTATCTTTCAGAAGAATTAAGGTTTCTTCGTTGGGAAGAATATCCAATGCCATCTGTGCCATTACAATTTTGTGCTGAGAATCTCATTAAACTTGATTTGCCTGGGAGTAATATCCAACAGCTTTGTGATGTCAATCAGCAATTTCCAAATCTAAAGGAAATACGTCTAAATGATTCAAAAAATCTCATGGCACTTCCAGATTTGTCTCAAGTCCCGGAGATTGGGCAAATGGTTCTTAATGGTTGTGTGAATTTACATCAAATCCATTCTTCAACTGTCCCGGAAAATCTTTTCCATTTATTCGTAGAAGATTGTGGGCCAATGAAGATAAATGTTGGGGGCAGTATGAAAGGGAGAAGTTCATCAGGGTTAGTGATTGTGTACAATTATTTGGATGTCCCCAATTTGACATTCAATAAAGTGACAATGAAGGTGTTGGTATGTGGCAAGATGATGTGTGGTGTTGGATTTAAGCATGTGAGAATGCCATTGGGAGAGACGGCGGAATTCATGAGAATGGGAATACAAAGTTTGGCGACTTTACTTCCATTTGTGAGGGTAGTTGAATTGTTAGAGAGTCCAATTGAGTTTGGGCATGATTTCAAGCAACATCATACCTACCATGTTTGTCATGCATACATTGGTCCTTTAAGCTGGAATGACTTCAGGCTTTATGTAAAGGTGAGGGGTGATGGAGAAGAAAGGGGTGTGGAAGATGATGAAGAAAAGGATGAGGATGATACAGAAATTATTAGTGAGAATGAAAGAGAAATAAGTAGTAAAGCTGATTGTGTAGCAGAGACAACATTATTATTAATGGAAGATGAACAAGAAGGGGCCGATGAGGATGATAGTAAGAGGGACGATACATTATTAACAACACTACTTATTCCTAACAGCATCCCTCGCTGGTCATTGTTGGTTCGACTGACATTAAAAGAGAGTGATATTATTATTGGGAATAATAATACAGGTTGTAGCATCATCCCTCAAGCTTCAATAATCCTCAAATCACTTAATGAAGATTGCAGAAGGAGGATTCAGCCTCTCTTGGCAGTACAACTCTCTTCCCCAGTATCCCCTTTACCTCATCATTCTTTCACAGTCCGTTATAACTACTTGGAGGGTGCGCCACACGATCCTTCTTTTCTTTATTTCAGCAGTGAATACTGGTCAAGTGATTATTTTGATAGTCATGGCTTAATTGTTCACTTTTTCAAGAACCACTAA 3078 0.3853 MEATFTLTLIEAVLILLAIAISKAITLISPLDHSRKDAVDSIPTVSCPSLIIGAPPAIKYDVFLSFRGEDTRHTFSSYLYEALDQVGLHTFMDHKLYKGDHISLILLKTIEKSEISLIIFSKDYASSTWCMDELVHIMKCKDKYGRLVVPIFYNVDPSNIRKQDGRFGDGFAKLKQRFKHDQKRVQDWKNALIKSASLSGWDSENFRPEFELVKKIVKDVLSKLNRRSSFHVDGLVGIDRQIQEVEELLSNARIVGIWGMGGIGKTTLASALFDKLKAEFEASYFVKDVRQLLEKNGLEELQEKCLKALLKDEDINTYNLRSDFVRRRLHHKKILFVLDDVDDFMATEDLIKACGWFGEGSKIIITSRDMQVLKHASAFLTYRVPTMYPHDALHLFSLKAFKQNRPFKNYLDLSQRAVYYCHGNPLALKVLGCFLHGREKEVWESALAKLNHTLHNGIFKVLKLSFDGLDDHQKNVFLDLAFFSNERWISLNYARASYANIDIDELEKRSLISEDGHGNIGMHALLVEMGLEISRQQLISNSEKPIRIWRPQDIYHFFNNDKGIGAIRCMSLDASKIKSIALRASHFQRMYDLIFLNVYKSDQRKPSKLNICEELVYLSEELRFLRWEEYPMPSVPLQFCAENLIKLDLPGSNIQQLCDVNQQFPNLKEIRLNDSKNLMALPDLSQVPEIGQMVLNGCVNLHQIHSSTVPENLFHLFVEDCGPMKINVGGSMKGRSSSGLVIVYNYLDVPNLTFNKVTMKVLVCGKMMCGVGFKHVRMPLGETAEFMRMGIQSLATLLPFVRVVELLESPIEFGHDFKQHHTYHVCHAYIGPLSWNDFRLYVKVRGDGEERGVEDDEEKDEDDTEIISENEREISSKADCVAETTLLLMEDEQEGADEDDSKRDDTLLTTLLIPNSIPRWSLLVRLTLKESDIIIGNNNTGCSIIPQASIILKSLNEDCRRRIQPLLAVQLSSPVSPLPHHSFTVRYNYLEGAPHDPSFLYFSSEYWSSDYFDSHGLIVHFFKNH 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4608g00003 1025 Gene3D - 387 470 IPR042197 -
Pral4608g00003 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 480 IPR027417 -
Pral4608g00003 1025 Gene3D - 222 379 IPR027417 -
Pral4608g00003 1025 SUPERFAMILY "Winged helix" DNA-binding domain 458 557 IPR036390 -
Pral4608g00003 1025 PRINTS Disease resistance protein signature 662 678 - -
Pral4608g00003 1025 PRINTS Disease resistance protein signature 328 342 - -
Pral4608g00003 1025 PRINTS Disease resistance protein signature 421 435 - -
Pral4608g00003 1025 PRINTS Disease resistance protein signature 254 269 - -
Pral4608g00003 1025 FunFam Disease resistance protein (TIR-NBS-LRR class) 56 226 - -
Pral4608g00003 1025 SUPERFAMILY Toll/Interleukin receptor TIR domain 57 201 IPR035897 -
Pral4608g00003 1025 SMART till_3 59 198 IPR000157 GO:0007165
Pral4608g00003 1025 Pfam NB-ARC domain 244 455 IPR002182 GO:0043531
Pral4608g00003 1025 Gene3D - 57 221 IPR035897 -
Pral4608g00003 1025 Gene3D Ribonuclease Inhibitor 564 726 IPR032675 -
Pral4608g00003 1025 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 726 IPR044974 GO:0006952
Pral4608g00003 1025 Pfam TIR domain 59 227 IPR000157 GO:0007165
Pral4608g00003 1025 SUPERFAMILY L domain-like 568 724 - -
Pral4608g00003 1025 ProSiteProfiles TIR domain profile. 58 224 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4608g00003 Pral-Chr4608 41744 58202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4608g00003 60 698 WRKY Transcription Factor Family AT4G12020 28.680 1.09e-64 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4608g00003 - - pcin:129286024 952.584