Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4608g00001 ATGGATGCAACCTTTGCTTTAATGCTTATAGAAGCTGTCTTGATTTTGCTGGCTATAGCAATTTCTAAAGCTGTCAGATTAATCTCTCCACCTCATGATAGTTGTAAAGATGTTGGTGATTCGATTCCCATGGTTTCTTCTCCTTCTTGTATTATTGTTTCTCCTCCTGCAATCAAGTATGACGTGTTTCTTAGCTTTAGAGGGGAAGAAACTCGTCACACTTTCTCAAGTTATCTCTATGAAGCACTTCGCCGAGTGGGCGTTCATACTTTTATGGATCACAAGCTCGACAAAGGAGATCATATCTCACCGATCCTTCTGAAAACAATAGAGGAATCACAGATATCTTTAATCATTTTCTCTGAAGATTATGCTTCTTCAACATGGTGTATGAATGAGCTCGTTCACATTATGAAATGTAAGGATAAGTACGGAAGGCTAGTCATCCCAATTTTCTACAACATAGATCCATCAAATATTCGGAAACAGAATGGAAGATTTGGAGATGGATTTGCTGAGATCAAGCAGAGATTTAACCACGACCAAAAAGGAGTGCCTGAACCCGAACTTGTCAAAAAAATTGTCAAAGATGTTTTGAGCAAATTGAACCGCAAGTCATCCATTCACATGGAAGGCTTAGTCGGGATCAATCATCAGATTCAAAAAGTTGAAGAGTTATTAAGTGAAGCTCGCATTGTGGGAATATGGGGTATGGGCGGTATTGGCAAGACCACTCTTGCTAGGGCTGTATTTGACAGATTGGAGCTAGAGTTTGAAGCTCTCTGCTTTGCTAAAGATGTGAGACAACAGCTGGCGGAAAGGAATGGATTGGATGAATTGCAAAAAAAATTCCTTAAGGATTTATTAATAGATGACGATATTAATGCTTACGATTTAAGATCCGCTTCTATAAGAACGAGGCTTCAGCGTAAAAAAATTCTTCTAGTACTTGATGATGTGGACAATTCTATAACGGCTGAAGATTTAATCAAAGCTGTTGTTGGTTTGGGGAAGGAAGTAGAATTATTATCACATCAAGAGATATGCAATTTGAACGCTTTCAAGCAAAATCAACCTTTTGAAAACTACTTGGAGTTATCAAAGTGGGTAGTGGATCATTGTGAAGGAAATCCATTAGCTCTGAAAGTGTTGGGTCGCCATCTTTATAGTAGAGGAAAAGAAGAGTGGGAAAGTGCTCTGGCGAAACTAAATCAAACTCCTCACAATGACATTTTTAATGTGCTCAAATTGAGTTTTGATGGACTTGATGACACACAGAAGGATGTATTTCTTGATCTTGCATTTTTGGTGAGTGCAGTAGAGTCAATTTCTGTGGATTGTGCAAGACGCTTATGTGGTGATGTTGCAACTATTCAGATAAGTGAACTTGGAGAGAGATCCCTCATTTCAGTGGATACATATGGTGAAATTCAGATGCATGCTTTACTAATCTATATGGGTCTTGAGATTTCTAAGCAACAATTAAAATCTAATCTTGACAATCCCATTCGGCTGTGGAGGCACGAGGATATTTATCGTTATTTTTCTATCAATGGCAAGTCAGATTGGGAAAAGCCTTCAAAGTTGAGTATTTGTGAAGGTTTGGATTATCTTTCAAAAGAATTAAGATTTCTTCATTGGGAAGGATATCCACTACCATCTGTGCCGTTACAATTTTGTGCTGAGAATCTCATCGAACTTAAGTTGCCAGACAGTAATATCCAACAGCTTTGGGATCAGCAATTTCCAAATCTAAAGGAAATAAATCTATGGGATTCAAAAAATATCAGGGCACTCCCAGATTTGTCTCAAGCCCCTAAGATTAAAACTTTGCGCCTTGATGGTTGTGTGAATTTGGGTCAAATCCATTTTTCGACTGTCCCGGAACAGAATGTCGATTTATGTATAGAAGATAGTGGGCCGATGCAGATAAATGTTGGGGGCAGTATGAAAGGGAGAAATTCATCAGGGTTAGTGATTGTGCACAATTATTTGGATGTTCCCAATTTGACATTCAATAAAGTGACAATGAAGGTGTTGGTGAGGGGTGATGGAGAAGAAAGGGGTGTGGAAGATGATGAAAAAGAGGATGAGGATGATAGAGAAATGATCAGTGAGAATGAAAGAGAAATGAGTAGTAAAAGTGATCAAGTAGTAGAGATGACATTATCATTAATGCAAGATGAACAAGAAGGTGCCGATGAGCATGATAGTAAGAGGGACCACACATTATTAACAATACTACTTATTCCTAACAGCATCCCTCGCTGTTCTGAAGATGATGTTATATTGACTCAAACGGATTCTCCTCCTGCTACCAAGTATGATGTGTTCCTTAGATTTGGAGGAGAAGACACTCGCCAAAATTTTGCCAAAGAAAGGAGAGAGACCGGAAGGAGTGCTTTTCAAAGAAGGTAG 2418 0.3867 MDATFALMLIEAVLILLAIAISKAVRLISPPHDSCKDVGDSIPMVSSPSCIIVSPPAIKYDVFLSFRGEETRHTFSSYLYEALRRVGVHTFMDHKLDKGDHISPILLKTIEESQISLIIFSEDYASSTWCMNELVHIMKCKDKYGRLVIPIFYNIDPSNIRKQNGRFGDGFAEIKQRFNHDQKGVPEPELVKKIVKDVLSKLNRKSSIHMEGLVGINHQIQKVEELLSEARIVGIWGMGGIGKTTLARAVFDRLELEFEALCFAKDVRQQLAERNGLDELQKKFLKDLLIDDDINAYDLRSASIRTRLQRKKILLVLDDVDNSITAEDLIKAVVGLGKEVELLSHQEICNLNAFKQNQPFENYLELSKWVVDHCEGNPLALKVLGRHLYSRGKEEWESALAKLNQTPHNDIFNVLKLSFDGLDDTQKDVFLDLAFLVSAVESISVDCARRLCGDVATIQISELGERSLISVDTYGEIQMHALLIYMGLEISKQQLKSNLDNPIRLWRHEDIYRYFSINGKSDWEKPSKLSICEGLDYLSKELRFLHWEGYPLPSVPLQFCAENLIELKLPDSNIQQLWDQQFPNLKEINLWDSKNIRALPDLSQAPKIKTLRLDGCVNLGQIHFSTVPEQNVDLCIEDSGPMQINVGGSMKGRNSSGLVIVHNYLDVPNLTFNKVTMKVLVRGDGEERGVEDDEKEDEDDREMISENEREMSSKSDQVVEMTLSLMQDEQEGADEHDSKRDHTLLTILLIPNSIPRCSEDDVILTQTDSPPATKYDVFLRFGGEDTRQNFAKERRETGRSAFQRR 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4608g00001 805 Gene3D - 191 340 IPR027417 -
Pral4608g00001 805 Gene3D Ribonuclease Inhibitor 489 635 IPR032675 -
Pral4608g00001 805 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 641 IPR044974 GO:0006952
Pral4608g00001 805 FunFam Disease resistance protein (TIR-NBS-LRR class) 56 186 - -
Pral4608g00001 805 Pfam TIR domain 59 208 IPR000157 GO:0007165
Pral4608g00001 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 433 IPR027417 -
Pral4608g00001 805 SUPERFAMILY Toll/Interleukin receptor TIR domain 55 178 IPR035897 -
Pral4608g00001 805 MobiDBLite consensus disorder prediction 690 704 - -
Pral4608g00001 805 Gene3D - 342 423 IPR042197 -
Pral4608g00001 805 MobiDBLite consensus disorder prediction 786 805 - -
Pral4608g00001 805 PRINTS Disease resistance protein signature 232 247 - -
Pral4608g00001 805 PRINTS Disease resistance protein signature 603 619 - -
Pral4608g00001 805 PRINTS Disease resistance protein signature 307 321 - -
Pral4608g00001 805 SUPERFAMILY L domain-like 538 625 - -
Pral4608g00001 805 SUPERFAMILY "Winged helix" DNA-binding domain 410 514 IPR036390 -
Pral4608g00001 805 SMART till_3 59 201 IPR000157 GO:0007165
Pral4608g00001 805 Pfam NB-ARC domain 220 325 IPR002182 GO:0043531
Pral4608g00001 805 MobiDBLite consensus disorder prediction 685 717 - -
Pral4608g00001 805 Gene3D - 44 184 IPR035897 -
Pral4608g00001 805 ProSiteProfiles TIR domain profile. 58 202 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4608g00001 Pral-Chr4608 14068 28058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4608g00001 60 616 WRKY Transcription Factor Family AT4G12020 25.270 1.45e-51 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4608g00001 - - pcin:129286024 717.227