Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4606g00042 ATGGCTGCTGAGCTTGTGGGTGGAGCATTTCTCTCTGCTGCTCTTCAAGTTGCTTTTCAAAGGCTGGCTTCTTCTGACATCACCCACTACTTCCGATCAAGAAACCTCAAAGATAGCTTGCTTAAGAAGCTTCACATCACCCTCATTTCTGTGAATCAAGTGCTTGGTGATGCAGAAGCAAGGCAGTACACAAGCCCAAATGTGAACACGTGGCTTCACGAGCTCAAACATGTGGTGTATGTCGCGGATGACCTCTTAGATGAGATTGCTACGGAGGCAACCAGGCTGAAGATCGAAACTGAGAATCAATCTGCTACCAGTAAGGTACGAGGCATCTTTACTTCTTTCGTTAATCAATTTGAAAAACACATCGAAGAAAGAATCCAGGAAGTGCTTGATGAACTGGAGTTCCTTGCAAAACAAAAGGATGCTCTGGGATTGAAGAAAGGCTCTGGCAGTGGTAGTGAAGCTGGAGTTGGTGTTAAACTATCCACCAGACTGCCAACTACATCTTTGGTGGTTGGTGAGTCCAGTGTATATGGTAGAGATAGTGACAGAGAAAAAATAATTGAGCGTTTACTTGATCAGGATCTGAGTATGAACCCACTATCCGTGATTTCTGTAGTGGGTATGGGTGGACTGGGTAAGACCACTCTTACTCAGCTAGTGTACAACGATGTAAGGATAGAGGATCAGTTTCAACTCAAAGCTTGGGTATGTATTTCAGAAGAATTTGATGTTGTTAGAATCACAAAAACAATACTTTCCGCATTTGAATGTTTCGTAACTGGATATGAAGACCTAAATCAGCTTCAGCTGAAATTGAAGGAGAAATTGGTGGGGAGGAAATTTTTGCTAGTTCTTGATGATATTTGGAATGAGCGCCAATCTGATTGGGAAGCTTTGCAAGTTCCTTTTTTCTATGGGACATCAGGAAGTAAGATCATTGTTACAACACGTAGTGAAAAAGTAGCACTAGTTGTCTGCTCTAGTAGAGTATACCGCTTGGCCTTATTAAATGAAGAAGATGGTTGGAAATTATTTGCAGAATATGCATTTAGAAATGAGAATGACAGCAAGAGGACAGATCTTGAGTCAATAGGTAAAAAGATTGTCCACAAGTGCAAAGGGTTGCCTTTAGCTATAAAAACATTGGGTGGCCTCTTGCACACGAAATCATCAGAGAAACAATGGCATGAAATCCTTAATTGTGAGATATGGCAGTTGTCAGATGGTGAGAGTGATATAACGCGAGCTTTAAGATTAAGCTACCATTACCTTCCTTCTTATTTAAAGCGGTGTTTTGCATTTTGTTCTATATTTCCAAAAGACTATCAAATTGAGAAGGACTCTCTAATCCTCATGTGGATGGCCGAAGATTTGTTGCATTGCCATCAAGGAAATAAAAATGTGGAAGAAATGGGAAGTCAAATCTTGGCTGAACTAGAATCAAGGTCATTTCTCCAAAAGTCAACAACGCATAATAGGTATATCATGCATGATCTCGTAAATGATCTTGCTAAATCAATATCTGGAGAGTTTTGTTTAAGGATTGAGGATGGTAACGTGCAAAACATTCATAAGAATGTTCGCTACTGTTCATACTCAGCTTCATGTGATAGCAGTGAAATATTACTAGAGCCTTTTCATGAGTGTAAACAATTACGATGTTTCGTGTCATTAAAACGACATTAA 1695 0.3994 MAAELVGGAFLSAALQVAFQRLASSDITHYFRSRNLKDSLLKKLHITLISVNQVLGDAEARQYTSPNVNTWLHELKHVVYVADDLLDEIATEATRLKIETENQSATSKVRGIFTSFVNQFEKHIEERIQEVLDELEFLAKQKDALGLKKGSGSGSEAGVGVKLSTRLPTTSLVVGESSVYGRDSDREKIIERLLDQDLSMNPLSVISVVGMGGLGKTTLTQLVYNDVRIEDQFQLKAWVCISEEFDVVRITKTILSAFECFVTGYEDLNQLQLKLKEKLVGRKFLLVLDDIWNERQSDWEALQVPFFYGTSGSKIIVTTRSEKVALVVCSSRVYRLALLNEEDGWKLFAEYAFRNENDSKRTDLESIGKKIVHKCKGLPLAIKTLGGLLHTKSSEKQWHEILNCEIWQLSDGESDITRALRLSYHYLPSYLKRCFAFCSIFPKDYQIEKDSLILMWMAEDLLHCHQGNKNVEEMGSQILAELESRSFLQKSTTHNRYIMHDLVNDLAKSISGEFCLRIEDGNVQNIHKNVRYCSYSASCDSSEILLEPFHECKQLRCFVSLKRH 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4606g00042 564 Coils Coil 121 141 - -
Pral4606g00042 564 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 438 IPR027417 -
Pral4606g00042 564 FunFam Probable disease resistance protein At1g61300 162 331 - -
Pral4606g00042 564 PANTHER DISEASE RESISTANCE PROTEIN RP 56 534 IPR044974 GO:0006952
Pral4606g00042 564 Pfam NB-ARC domain 186 403 IPR002182 GO:0043531
Pral4606g00042 564 Gene3D - 338 422 IPR042197 -
Pral4606g00042 564 PRINTS Disease resistance protein signature 205 220 - -
Pral4606g00042 564 PRINTS Disease resistance protein signature 375 389 - -
Pral4606g00042 564 PRINTS Disease resistance protein signature 278 292 - -
Pral4606g00042 564 Gene3D - 13 129 - -
Pral4606g00042 564 FunFam Probable disease resistance protein At5g66910 338 423 - -
Pral4606g00042 564 Pfam Rx N-terminal domain 10 103 IPR041118 -
Pral4606g00042 564 FunFam Probable disease resistance protein At1g63360 424 509 - -
Pral4606g00042 564 Gene3D - 163 332 IPR027417 -
Pral4606g00042 564 Gene3D - 423 510 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4606g00042 Pral-Chr4606 503933 505730 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4606g00042 185 510 WRKY Transcription Factor Family AT5G45050 24.269 3.07e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4606g00042 - - pcin:129313137 768.459