Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4606g00041 ATGGCGCAAGGAGCAGGATCTTCTTCCGTCACCCGCAGATGGAGCTATGATGTGTTTCTTAGCTTTCGGGGGAAAGATACTCGCTTGAATTTCGTCAGTCATCTCTACGAGTCTCTTCGACAAAGCGGCATCCGTACCTTCATTGATGATGAATCCCTCGATGCAGGGAAAGAAATCCGACCGTCTCTTTTTGAAGCCATCAAGGAATCCAGGATAGCCATCATAATTTTCTCCCAAAACTATGCAACTTCAACCTTCTGTCTGGATGAACTTGTCCAGATCATTGAGTGTTTCAAAGAAGAAAGTCGTTTGGTGTGTCCAGTGTTTTATCATGTGGATCCCTCATATGTGCGACATCAGACAGGGAGCTACGGACATGCTTTGGCTGATCTGCAGAGCAGACCGGGAATAAAGGATGAGACGTTGCGGAAGTGGAGGTGGGCTTTGTCTCAGGCAGCTGACTTGTCAGGCTGGCATTTTCAACTTGGGATTACAAAAGAACAAGAGCATATTAAAACGATTACTCGTGAAGTCTCTGCCAAGATTAATCGCACTCTTTTAGAAGTTGCAGATTATCCAGTTGGCCTGGAGTTTCGAGGGAAAGAAGTAATTTCACTTCTAGATCTTGGATCTAACAAAAACCCACTGATGGTTGGAATTTGTGGCATTGGTGGGATAGGTAAATCAACAATTGCAAGAGCTGTGTATAACTCAGTTGCTGATAATTTTGATGGTTTGTGTTTTCTTGCTAATGTTAGAGAAATTTCTTACAAGCATGGCTTGTCACATCTTCAAGAGACATTACTTCATAAATTGGTGAGGGAGAAGGAACTCAAATTGGGTGATTTCTATGAAGGAATTTCAATAATAAAGAATAGGCTCCAAAACAAGAAGATTCTTTTAATTCTTGATGATGTTGACAAAGCGGAGCAATTACGAGCATTAGCTGGAAGCTGTGAATGGTTTGGCCTAGGAAGTAGAATCATTATCACAACAAGGGATAAACAATTGTTAGCAAGTCGCGGAATTCAAAGAATTTATGTTGTCAAGGGATTAAGTGCTGATGAATCTCTTCAGTTAATCAAATGGCATGGCTTTAAAGAGCTTACAAGGGATTTAGATCATTACAAGGATGTTCTGAATCGTGCTGTAAAATATTCATGTGGCCTTCCATTAGCCTTGGAAGTGATTGGCTCTAATTTATGTGATAAAGAAGTTGATGTATGGAGTTCTGCATTAAATGATTATGAAGCTATACTTGATAGAGATGTTTTTGAAGTCCTTAAATTAAGCTATAATGCTTTAAGCAGAGAAGAACATAAGGAAATTTTTCTTGACTTGGCCTGTTTTTTTAATGGTGAGAAGTTGGGAGGCATCATAAATATGATGATGAGTTTTCGGGGTGTTGAACCAACACATGCCATTAATGTGTTGACAGATAAATCTCTAATAAAGATTAAAGAAGATCGTGTGATAATGCATGACTTGATTGAAGATATGGGTAAAGAAATTGTTCGGCAACAATCACGAAAAGAGCCCGGGAAACGCAACAGGTTATGGTGTTATGAAGACATTCTTGATGTCTTCCAAAATAACACGGGCACTGATGAAATTGAAGTCATAATTCTTGACTTACCCAAAGATAAAGAAATCCAATGGAATGGCAAGGCATTTATGAAGACGAAGAAGCTTAAAGTGCTTGTCATAAAGAATGCAAGCTTTTCTGAAGGCATCAAATATCTCCCAAATAGTCTCTGCGTGTTAGAATGGAAGGGGTACCCTTTTAAGTTTTTGCCATCTAATTTTCATCCAAAAAAACTCATCCATCTTGATTTGTCCAATAGTTGTGTGGTGCTCCAACCTTTTAATAAGAAATTGGAGAGTTTAGGTTGCATGAATTTTAGCAACTGTAAATCCTTGAGCCAATTACCAAACCTGTCGGGAGTTCCTAATTTAACAGAATTGTGGCTTGATGGTTGTACAAACTTAATTGAAATCCATGATTCCCTTGGATTCTTGGATAAACTTAGAGTATTGAGTGCCATGCGATGCAAAAACTTGAGGACTTTGCCACCTACTTTTAAGCTATCATCCCTTGAACATCTTAGTCTATTTGGATGTTCAACTCTTCAATGTTTTCCTGAAATATTAGAAAAGATGGAGAAGTTGAAGACACTTGATTTGGAGAGTACGGCCATTGCAAAACTGCCATCTTCAATTTGCAACCTTGTTGAGCTTGAAACCTTAAACATGGAGGCATGCCCTAATCTTAAGCAATTACCAGCTAGTATTTGTATGTTGCCAAAACTATTGGAACTATCAACAAATTTTTGTGAAGGGATGAAGCATTTCAGGAAATGCGAAGGTGAAAAAGAAGCAAGCTTAGACTGCATAACCATTTCGACCAACGAAAAAGAAGGCAACTCAGCCATGTCTTCAAGAAAACATTTCCGTTTCTCAAATTGCAACTTAACAAATGACTCTCTTGCTCTATGTGTCTTCTGTATTCCTGATGTTGTACATTTAGATCTAAGGTTTAATAGTTTCACAACTCTTCCAGCATGCATAGAAGAATGTGAGAATTTAAGGTATCTTTTGCTGGATCATTGTGTGCCATTGCAAAAAATTGTGAGGATGCCACCAAAATTGGAAACATTCAGCGCCATAGGTTGCACTTCTTTGTCTAAGTCATCCAAAAAAAGAGTATTGGATCAGGCATTCTACTTTGGAAATGGGAAAAGAAACTTTATCTTGCCGGGAAAAAGAATCCCTCAATGGCTTGACTATTATAGTCGAGGAAGCTCCGTGTCTTTTTGGATTCGTGATAAGGTCCCAAAATTTGCTCTTTGGTTTCTTGTTGAAAATGACCAAGTTGGTCCTTACAAATGTGTATTCTCAATGCACATCAATGATACCAAGTTAGATATTTCTTCTGGATGGCTTTCAAAATCAGTTATACTGGCCAATCATATATACATATGTGATATGGAAATCATAATTGAGAAGGTTAGACCCCGTCTTGCAAATAGATGGAATCATGTGAGGGTTTCAATCAAGAGCAAAGCACGAAAGATAAAAGTGGAAAAAGAAATTTCTATAGCAGTTCATGTATACAGGCAACAAAATGACTCGGAAAATATTCGATTCAAGGACCCTAGAACACACCTTGATTGCAACTCGTGGCAAAAGAAACAACCACCACCTCAAGATTGGGAAGAGCTCGAAGATGAAATCAATGAGGATTCAAATTCAACAAAATTTGCAGAGTCAATCCAAAAAATCACGCCTTATCAAGAACCCATGAGTGCTGAGCTTGTGAGTGGAGCGTTTGATTGGCTGGCGCAAGGAGCAGGAACTTCTTCTATCGCCTGCATGCAAGGAGCAAGAGCCGTATTCAGGGGTGATCCCTGCGCATTTCTCAGCGGAGGCATGAGTCGTCTCTTCATTCATGACTTGCTCAACTCAAACGGAGAAACCCAACTGTTCCTTTCCAGACGCATCAAGGAAACCATGATGGCCATCATAGTTTTCTCCAAAATCTATGCAACCTCAACCATCTGTGTGGATGAAATTGTCCAGATTATGAAGTATTTTGAAAAAGAAAGTCGGCGGCTATATTCAATGTTTTATTATGTGGATCCATCAGAGTTGCCACCTCAGACAGCTCGTCACGGACGAGCTCTTCCTAATTTGCACAAAATATCGAATAAGAGTTATCATCGTTGGCTTTGGTTGCGTGAAGAAGTCAGGCGGTCGCGCGGGCTTCGACTCGTGCGTCGCTTGGCCTCGGTGCCCCCCGACTTGGAAGACATATGA 3816 0.3978 MAQGAGSSSVTRRWSYDVFLSFRGKDTRLNFVSHLYESLRQSGIRTFIDDESLDAGKEIRPSLFEAIKESRIAIIIFSQNYATSTFCLDELVQIIECFKEESRLVCPVFYHVDPSYVRHQTGSYGHALADLQSRPGIKDETLRKWRWALSQAADLSGWHFQLGITKEQEHIKTITREVSAKINRTLLEVADYPVGLEFRGKEVISLLDLGSNKNPLMVGICGIGGIGKSTIARAVYNSVADNFDGLCFLANVREISYKHGLSHLQETLLHKLVREKELKLGDFYEGISIIKNRLQNKKILLILDDVDKAEQLRALAGSCEWFGLGSRIIITTRDKQLLASRGIQRIYVVKGLSADESLQLIKWHGFKELTRDLDHYKDVLNRAVKYSCGLPLALEVIGSNLCDKEVDVWSSALNDYEAILDRDVFEVLKLSYNALSREEHKEIFLDLACFFNGEKLGGIINMMMSFRGVEPTHAINVLTDKSLIKIKEDRVIMHDLIEDMGKEIVRQQSRKEPGKRNRLWCYEDILDVFQNNTGTDEIEVIILDLPKDKEIQWNGKAFMKTKKLKVLVIKNASFSEGIKYLPNSLCVLEWKGYPFKFLPSNFHPKKLIHLDLSNSCVVLQPFNKKLESLGCMNFSNCKSLSQLPNLSGVPNLTELWLDGCTNLIEIHDSLGFLDKLRVLSAMRCKNLRTLPPTFKLSSLEHLSLFGCSTLQCFPEILEKMEKLKTLDLESTAIAKLPSSICNLVELETLNMEACPNLKQLPASICMLPKLLELSTNFCEGMKHFRKCEGEKEASLDCITISTNEKEGNSAMSSRKHFRFSNCNLTNDSLALCVFCIPDVVHLDLRFNSFTTLPACIEECENLRYLLLDHCVPLQKIVRMPPKLETFSAIGCTSLSKSSKKRVLDQAFYFGNGKRNFILPGKRIPQWLDYYSRGSSVSFWIRDKVPKFALWFLVENDQVGPYKCVFSMHINDTKLDISSGWLSKSVILANHIYICDMEIIIEKVRPRLANRWNHVRVSIKSKARKIKVEKEISIAVHVYRQQNDSENIRFKDPRTHLDCNSWQKKQPPPQDWEELEDEINEDSNSTKFAESIQKITPYQEPMSAELVSGAFDWLAQGAGTSSIACMQGARAVFRGDPCAFLSGGMSRLFIHDLLNSNGETQLFLSRRIKETMMAIIVFSKIYATSTICVDEIVQIMKYFEKESRRLYSMFYYVDPSELPPQTARHGRALPNLHKISNKSYHRWLWLREEVRRSRGLRLVRRLASVPPDLEDI 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4606g00041 1271 SUPERFAMILY "Winged helix" DNA-binding domain 423 529 IPR036390 -
Pral4606g00041 1271 SUPERFAMILY L domain-like 540 893 - -
Pral4606g00041 1271 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral4606g00041 1271 Gene3D - 351 436 IPR042197 -
Pral4606g00041 1271 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral4606g00041 1271 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral4606g00041 1271 SUPERFAMILY Toll/Interleukin receptor TIR domain 1160 1238 IPR035897 -
Pral4606g00041 1271 Gene3D - 1137 1263 IPR035897 -
Pral4606g00041 1271 SMART till_3 15 155 IPR000157 GO:0007165
Pral4606g00041 1271 Gene3D Ribonuclease Inhibitor 718 904 IPR032675 -
Pral4606g00041 1271 Gene3D - 186 344 IPR027417 -
Pral4606g00041 1271 SMART AAA_5 214 352 IPR003593 GO:0016887
Pral4606g00041 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Pral4606g00041 1271 Gene3D - 9 185 IPR035897 -
Pral4606g00041 1271 PRINTS Disease resistance protein signature 718 734 - -
Pral4606g00041 1271 PRINTS Disease resistance protein signature 293 307 - -
Pral4606g00041 1271 PRINTS Disease resistance protein signature 387 401 - -
Pral4606g00041 1271 PRINTS Disease resistance protein signature 217 232 - -
Pral4606g00041 1271 Pfam TIR domain 1147 1243 IPR000157 GO:0007165
Pral4606g00041 1271 Pfam TIR domain 16 184 IPR000157 GO:0007165
Pral4606g00041 1271 Pfam NB-ARC domain 203 415 IPR002182 GO:0043531
Pral4606g00041 1271 Gene3D Ribonuclease Inhibitor 540 717 IPR032675 -
Pral4606g00041 1271 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 792 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4606g00041 Pral-Chr4606 489812 496449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4606g00041 16 784 WRKY Transcription Factor Family AT4G12020 31.658 1.30e-83 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4606g00041 - - pcin:129295352 1239.17