Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4606g00040 ATGGGCAGAATTACAAAAGAACAGGAGCATATTAAGAAGATTACTCGCAAAGTCTCTGCCGAGATTAAACCCAATCATTTAAATGTTGCCGATTATCCAGTTGGTCTTGGGTTACGGGTGCAAGAAATAATCTCACTTTTAAATCTTTCATCCAATAAAGAATCGGAGATGGTTGGAATTTGTGGCATTGGTGGAATAGGTAAATCAACAATTGCAAGGGCTGTGTATAATTCAGTTGCTGATAATTTTGATGGTTTATGTTTTCTTCCTAATGTTAGAGAAATTTCTAACAAGCATGGCTTGCCCCAACTTCAAGAGTTGTTACTCTATAAATTGGTGGGGGAGAAGAAACTCAGATTGGGTGATTTCAATGAAGGAATTCCAATAATAAAAAATAGGCTCCAAAACAAGAAGATTCTTTTAATTCTTGATGACGTTGATGAAGTGGAGCAATTATGGGCATTAGCTGCAAGCTGTGAGTGGTTTGGCCTTGGAAGTAGAATTATTATCACGACAAGGGATAAACAATTACTAGCAAGTCTTGGAATTCAAAAAATTTATTATGTCGAGATACTAAATGCTGATGACTCTCTTCAGTTAATTGAAAGGCATGCCTTTAAAAACCTTACGGGGTATATAGATCATTACAAGGATGTTTTGAATCGTGCCACAAAATATTCAGGTGGCCTTCCATTAGCCTTGATAATGATTGGCTCTCACTTATGTGATAAAAAAGCTGATGATTGGACTTCTGCATTAAATGATTATGATGGAATACGTCATGAACGCGTTTTTGAAGTCCTTAAAGTAAGCTATGATGCTTTAAGCAGAGAACAGCACAAGGAAATTTTTCTTGACCTGGCCTGTTTTTTTAACGGTGAGAAGTTGGGAGACGTCATAAATATGTTGACGAGTTTTCGCGGTGTTGATCCAACACATGCTATTAATGTGTTGACGGATAAATCTCTAATAAAGATAGAAAAAGATTGTGTGACAATGCATGACTTGATTGAAGATATGGGTAAAGAAATTGTTCGCCGACAATCACCGAAAGAGCCCGGTAAACGTAACAGGTTATGGCGTTATGAAGACATTCTTCATGTCTTGCAAAATAACACGGTTAGAGCACAACATACATGCCTCTTTATTTAA 1152 0.3681 MGRITKEQEHIKKITRKVSAEIKPNHLNVADYPVGLGLRVQEIISLLNLSSNKESEMVGICGIGGIGKSTIARAVYNSVADNFDGLCFLPNVREISNKHGLPQLQELLLYKLVGEKKLRLGDFNEGIPIIKNRLQNKKILLILDDVDEVEQLWALAASCEWFGLGSRIIITTRDKQLLASLGIQKIYYVEILNADDSLQLIERHAFKNLTGYIDHYKDVLNRATKYSGGLPLALIMIGSHLCDKKADDWTSALNDYDGIRHERVFEVLKVSYDALSREQHKEIFLDLACFFNGEKLGDVINMLTSFRGVDPTHAINVLTDKSLIKIEKDCVTMHDLIEDMGKEIVRRQSPKEPGKRNRLWRYEDILHVLQNNTVRAQHTCLFI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4606g00040 383 Gene3D - 12 185 IPR027417 -
Pral4606g00040 383 Gene3D - 191 276 IPR042197 -
Pral4606g00040 383 Pfam NB-ARC domain 40 272 IPR002182 GO:0043531
Pral4606g00040 383 SUPERFAMILY "Winged helix" DNA-binding domain 263 370 IPR036390 -
Pral4606g00040 383 PRINTS Disease resistance protein signature 133 147 - -
Pral4606g00040 383 PRINTS Disease resistance protein signature 57 72 - -
Pral4606g00040 383 PRINTS Disease resistance protein signature 227 241 - -
Pral4606g00040 383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 287 IPR027417 -
Pral4606g00040 383 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 369 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4606g00040 Pral-Chr4606 458629 459780 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4606g00040 58 371 WRKY Transcription Factor Family AT5G45050 33.333 3.43e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4606g00040 - - pcin:129295352 421.009