Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4606g00038 ATGGCGCAAGGAGCAGGATCTTCTTCCGTCACCCGCAGATGGAGCTATGATGTGTTTCTTAGCTTTCGGGGGAAAGATACTCGCCTGAATTTCGTCGGTCATCTCTACGAGTCTCTTCGTCAAATAGGGATTCGTACCTTCATTGATGATGAATCCCTTGATGCAGGCAAACAAATCCGACCGTCTCTTTTTGAAGCCATCAAGGAATCCAGGATAGCCATCATAATTTTCTCCCAAAACTATGCAACCTCGACTTTTTGTCTGGATGAACTTGTCCAGATTATTGAGTGTTTCAAAGAAGAAAGTCGGTTGGTTTATTCTGTGTTTTATCATGTGGATCCATCGGATGTGCGACATCAGAGAGGGAATTACGGACAAGCTTTGGCTGATCTACAAAAGAGATTGGAAGGAAACGATGAGAAGTTGCAGAAGTGGAGGTGGGCTTTGTCCCAAGCAGCTGACTTGTCAGGCTGGCATTTTCAACCTGGAATTACAAAAGAACAGGAGCATATTAAGAAGATTACTCGCAAAGTCTCTGCCGAGATTAAACCCAATCATTTAAATGTTGCCGATTATCCAGTTGGTCTTGGGTTACGGGTGCAAGAAATAATCTCACTTTTAAATCTTTCGTCCAATAAAGAATCGGAGATGGTTGGAATTTGTGGCATTGGTGGAATAGGTAAATCAACAATTGCAAGGGCTGTGTATAATTCAGTTGCTGATAATTTTGATGGTTTATGTTTTCTTTCTAATGTTAGAGAAATTTCTAACAAGCATGGCTTGCCCCAACTTCAAGAGATGTTACTCTATAAATTGGTGGGGGAGAAGAAACTCAGATTGGGTGATTTCAATGAAGGAATTCCAATAATAAAAAATAGGCTCCAAAACAAGAAGATTCTTTTAATTCTTGATGACGTTGATGAAGTGGAGCAATTATGGGCATTAGCTGCAAGCTGTGAGTGGTTTGGCCTTGGAAGTAGAATTATTATCACGACAAGGGATAAACAATTACTAGCAAGTCTTGGAATTCAAAAAATTTATTATGTCGAGGTACTAAATGCTGATGACTCTCTTCAGTTAATTGAAAGGCATGCCTTTAAAAACCTTACGGGGGATATAGATCATTACAAGGATGTTTTGAATCGTGCCATAAAATATTCAGGTAGCCTTCCATTAGCCTTGATAATGATTGGCTCTCACTTATGTGATAAAAAAGCTGATGATTGGACTTCTGCATTAAATGATTATGATGGAATACGTCATGAACGCGTTTTTGAAGTCCTTAAAGTAAGCTATGATGCTTTAAGCAGAGAACAGCATAAGGAAATTTTTCTTGACCTGGCCTGTTTTTTTAACGGTGAGAAGTTGGGAGACGTCATAAATATGTTGATGAGTTTTCGCGGTGTTGATCCAACACATGCTATTAGTGTGTTGACGGATAAATCTCTAATAAAGATAGAAAAAGATCGTGTGACAATGCATGACTTGATTGAAGATATGGGTAAAGAAATTGTTCGCCGACAATCACCAAAAGAGCCCGGTAAACGTAACAGGTTATGGCGTTATGAAGACATTCTTCATGTCTTGCAAAATAACACGGGCACGGATGAAATTGAAGTCATAATTCTTGACTTACCCAAAGATAAAGAAATCCAATGGAATGGCAAGGCATTCGCGAAGATGAAGAAGCTCAAAGTGCTTGTCATAAAGAATGCAAGATTTTCTAAAAGCATCAAATATCTTCCAAATAGTCTCTGCGTGTTGGAATGGAAGGGGTACCCTTTTAAGTCCTTGCCATCTAATTTTCATCCACCAGCACTCGTCCATCTTGATTTGTCCAATAGTTGTGTAGTGCTCCAACCTTTTAATAAGGCATTCTACTTTGGAAATGGGAAAAGAAACTTTGTTTTGCCAGGAAAAAGAATCCCTCAATGGCTTGAATATTATAGTCGAGGAAGCTCCATGTCTTTTTGGATTCGTGATAAGTTCCCAAAAGTTGCTCTTTGGTTTCTTGTTGAAAATGACCAAGTTTATCCTTACAGATGTATATTCTCAGTGCACATTAATGACACCAAGTTAGATATTTCTTCAGAGTGGCTTTTACTGTCAACTATAGTGCCTAATCATATATACATATGTGACATGGAAAGCATAATTAAGAAGGTTGAACTCCGTCATGCAGATAGATGGAATCAAGTGAAGGTTTCAATTAAGAGTAATACACGAGAAGTAATAATGGACAAGGAAATTTTCATGGCAGTTCATGCATATAGGCAACAAAATGACTTTGAAGATATCCAATTCAGGGACCCGAGAATATACCTTGGCTGCAACTCATGGCAAAAAGTACAACAATCACCTCAAGATTGGGAAGAACTTGAAGATGAAATGAATGAGGATTCAAATTCAACAAAAGTCGCAGATTCAATCCAAAAAATCACACCTTATCAAGAAGCAGAACCCATGACTACTAAGCTTACGGGTGGAACATTTGATTGGCCGGTGCAAGGAGCAAAAACCTCTTCTGTCGCCCGCTTGTGGACTTTTGATGTGTATGTTAGCTTTCGAGGTGCAGATACTCGCTTTGGTTTCATTGCTCATCTTTACGAATCTCTTCGTCAAAGCGGGATTCGTCCCTTCATTGATGACAAATACCTCCCCGCAAGTGAAGAAATCAAACCATCTCTTTCCAAAGCCATCAAGGAATCTAGGATGGCCATAATAGTTTTCTCCAAAACCTATGCAGCCTCAACCATCTGTCTGGATGAACTTGCCCAGATTATTGAGTATTTCAAAGAAGAAAATCGGCGGGTATATTCAGTGTTTTATGATGTGGATCCATCAGAGGTGCGGCATCAGACAGGGCGCTATGGACAAGATCTTGCTAATTTGCAAAACAGATTGGGAATAAATGATGAGAGGTTACAGAAATGGAGGAGGGCTTTGTCTCAAGCAGCTGACTTATCAGGCTGGCGTTATCAACCTGGGTCAAGAAAGAGTACAATAGAAAATCCTATGCTGGAGAATTAA 3030 0.395 MAQGAGSSSVTRRWSYDVFLSFRGKDTRLNFVGHLYESLRQIGIRTFIDDESLDAGKQIRPSLFEAIKESRIAIIIFSQNYATSTFCLDELVQIIECFKEESRLVYSVFYHVDPSDVRHQRGNYGQALADLQKRLEGNDEKLQKWRWALSQAADLSGWHFQPGITKEQEHIKKITRKVSAEIKPNHLNVADYPVGLGLRVQEIISLLNLSSNKESEMVGICGIGGIGKSTIARAVYNSVADNFDGLCFLSNVREISNKHGLPQLQEMLLYKLVGEKKLRLGDFNEGIPIIKNRLQNKKILLILDDVDEVEQLWALAASCEWFGLGSRIIITTRDKQLLASLGIQKIYYVEVLNADDSLQLIERHAFKNLTGDIDHYKDVLNRAIKYSGSLPLALIMIGSHLCDKKADDWTSALNDYDGIRHERVFEVLKVSYDALSREQHKEIFLDLACFFNGEKLGDVINMLMSFRGVDPTHAISVLTDKSLIKIEKDRVTMHDLIEDMGKEIVRRQSPKEPGKRNRLWRYEDILHVLQNNTGTDEIEVIILDLPKDKEIQWNGKAFAKMKKLKVLVIKNARFSKSIKYLPNSLCVLEWKGYPFKSLPSNFHPPALVHLDLSNSCVVLQPFNKAFYFGNGKRNFVLPGKRIPQWLEYYSRGSSMSFWIRDKFPKVALWFLVENDQVYPYRCIFSVHINDTKLDISSEWLLLSTIVPNHIYICDMESIIKKVELRHADRWNQVKVSIKSNTREVIMDKEIFMAVHAYRQQNDFEDIQFRDPRIYLGCNSWQKVQQSPQDWEELEDEMNEDSNSTKVADSIQKITPYQEAEPMTTKLTGGTFDWPVQGAKTSSVARLWTFDVYVSFRGADTRFGFIAHLYESLRQSGIRPFIDDKYLPASEEIKPSLSKAIKESRMAIIVFSKTYAASTICLDELAQIIEYFKEENRRVYSVFYDVDPSEVRHQTGRYGQDLANLQNRLGINDERLQKWRRALSQAADLSGWRYQPGSRKSTIENPMLEN 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4606g00038 1009 Gene3D - 843 1007 IPR035897 -
Pral4606g00038 1009 SUPERFAMILY Toll/Interleukin receptor TIR domain 844 991 IPR035897 -
Pral4606g00038 1009 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral4606g00038 1009 FunFam Disease resistance protein (TIR-NBS-LRR class) 845 1008 - -
Pral4606g00038 1009 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral4606g00038 1009 Pfam TIR domain 849 984 IPR000157 GO:0007165
Pral4606g00038 1009 Pfam TIR domain 16 180 IPR000157 GO:0007165
Pral4606g00038 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 447 IPR027417 -
Pral4606g00038 1009 PRINTS Disease resistance protein signature 293 307 - -
Pral4606g00038 1009 PRINTS Disease resistance protein signature 559 575 - -
Pral4606g00038 1009 PRINTS Disease resistance protein signature 217 232 - -
Pral4606g00038 1009 PRINTS Disease resistance protein signature 387 401 - -
Pral4606g00038 1009 SUPERFAMILY "Winged helix" DNA-binding domain 423 530 IPR036390 -
Pral4606g00038 1009 Gene3D - 351 436 IPR042197 -
Pral4606g00038 1009 SUPERFAMILY L domain-like 540 617 - -
Pral4606g00038 1009 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral4606g00038 1009 Gene3D - 185 345 IPR027417 -
Pral4606g00038 1009 ProSiteProfiles TIR domain profile. 847 986 IPR000157 GO:0007165
Pral4606g00038 1009 Pfam NB-ARC domain 200 432 IPR002182 GO:0043531
Pral4606g00038 1009 Gene3D - 12 184 IPR035897 -
Pral4606g00038 1009 SMART till_3 15 155 IPR000157 GO:0007165
Pral4606g00038 1009 SMART till_3 848 988 IPR000157 GO:0007165
Pral4606g00038 1009 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 687 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4606g00038 Pral-Chr4606 357666 393117 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4606g00038 16 617 WRKY Transcription Factor Family AT4G12020 29.919 1.89e-62 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4606g00038 - - pcin:129295352 803.512