Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4606g00035 ATGGCGCAAGGAGCAGGATCTTCTTCCGTCACCCACCGATGGAGTTATGATGTGTTTTTAAGCTTTCGGGGAGAAGATACTCGCCTGACTTTCGTCGGTCATCTCTATGAGGCTCTTCGTCAAAGAGGGATTCGGACCTTCATTGATGATGAATCCCTTGATGCAGGCAAAGAAATCCGACCGTCTCTTTTTGAAGCCATCAAGGAATCCAGGATAGCCATCATAATTTTCTCCCAAAACTATGCAACCTCAACCTTCTGTCTGGATGAACTTGTCCAGATTATTGAGTGTTTCAAAGAAGAAAGTCGGCTGGTATATTCAGTGTTTTATCATGTGAATCCATCGGATGTGCGACGTCAGAGAGGGAATTACGGACAAGCTTTGGCTGATCTACAAAACAGATTGGAAGGAAACGATGAGAAGTTGCAGAAGTGGAGGTGGGCTTTGTCCCAAGCAGCTGACTTGTCAGGCTGGCATTTTCAACCTGGAATTACAAAAGAACGGGAGCATATTAAGACGATTACTCGCAAAGTCTCTGCCGAGATTAATCACACTCATTTAAATGTTACCAATTATCCAGTTGGTCTTGGGTTACGAGTGCAAGAAGTAATCTCACTTTTAAATCTTTGGTCCAATGAAGAAGCGGAGATGGTTGGAATTTGTGGCGTTGGTGGAATAGGTAAATCAACAATTGCAAGGGCTGTGTATAATTCAGTTGCTGATAGTTTTGATGGTTTATGTTTTCTTTCTAATGTTAGAGAAATTTCTTACAAGCATGGCTTGTCACATCTTCAAGAGACATTACTTTGTGAATTGGTGGGAGAGAAGGAACTCAAATTGGGTAATTTCTATAAAGGAATTTCAATAATAAAGAATAGGCTCCAAAACAAGAAGATTCTTTTAATTCTTGATGATGTTGACAAAGTGGAGCAATTACGAGCATTAGCTGGAAGCTGTGAATGGTTTGGCCTGGGAAGTAGAATCATTATCACGACAAGGGATAAACAGTTGCTAGCAAGTCGGGGAATCCAAAGAATTTATGATGTCAAGGGGTTAAGTGCTGATGAATCTCTTCAGTTAATTAAAAGGCATGGCTTTAAAGGGCTGACGGGGGATTTAGATCATTACAAGGATGTTCTGAATCGTGCCATAAAATATTCATGTGGCCTTCCATTAGCCTTGGAAATTATTGGCTCTAACTTGTGTGATAAAAGAGTTGATGAATGGACTTCTGCATTAGATGAATATGAAAGAATACCTGATGAAGACGTTTTTAAAGTCCTTAAATTAAGCTATGATGCTTTAAGCAGAGAACAGCATAAGGAAATTTTTCTTGACTTGGCCTGTTTCTTTAATGGTGAGAAGTTGGGAGATGTCGTAAATATGATGATGAGTTTTCGTGGTGTTGAACCAACACATGCCATTAATGTGTTGACGGATAAATCTCTAATAAAGATTAAAGAAGATCGTGTGATAATGCATGACTTGATTGAAGATATGGGTAAAGAAATTGTTCGGCAACAATCACGAAAAGAGCCTGGGAAACGCAACAGGTTATGGTGTTATGAAGACATTCTTGATGTCTTACAAAATAACACGGGCACTGATGAAATTGAAGTCATAATTCTTGACTTACCGAAAGATAAAGAAATCCAATGGAATGGCAAGGCATTCAAGAAGATGAAGAAGCTCAAAGTGCTTGTCATAAAGAATGCAAGCTTTTCTGAAGGCATCAAATATCTCCCAAATAGTCTGTGTGTGTTGGAATGGAAGGGGTACCCTTTTAAGTATTTGCCATCTAATTTTCATCCAACAAAAGTCGTCCATCTTGATTTGTCCAATAGTTGTGTAGTGCCTCAACTTTTTGATAAGAAATTACAGAGTTTAAGTCGCGTGAATATTAGCAACTGTAAAGTCTTGAGCGAAATACAAGACTTGTCAGAAGTCCCTAATTTAACAGAATTGCGGCTTGATGGTTGTATAAACTTAACTAAAATCCATGATTCCCTTGGATTCTTGGGTAAACTCAAAAGATTGAGTGCTATGCGATGCAAAAACTTGAAGACTTTACCCCCTCGTATTAAGCTAACATCCCTTGAACATCTAAATCTCTTTGGCTGCTCGAGCCTTAAAAGTTTTCCTGAGATATCAGACAAGATGGAGAAGTTGAAGACACTTGATTTGGAGAGTACGGCCATTGAGAGTTTGCCATCTTCAATTTGCAACCTCGTTGGACTTGAAAGCTTAAACATGGAAGCGTGTCCTGATCTTAAGCAATTACCAGCTAAAAATTAA 2295 0.3908 MAQGAGSSSVTHRWSYDVFLSFRGEDTRLTFVGHLYEALRQRGIRTFIDDESLDAGKEIRPSLFEAIKESRIAIIIFSQNYATSTFCLDELVQIIECFKEESRLVYSVFYHVNPSDVRRQRGNYGQALADLQNRLEGNDEKLQKWRWALSQAADLSGWHFQPGITKEREHIKTITRKVSAEINHTHLNVTNYPVGLGLRVQEVISLLNLWSNEEAEMVGICGVGGIGKSTIARAVYNSVADSFDGLCFLSNVREISYKHGLSHLQETLLCELVGEKELKLGNFYKGISIIKNRLQNKKILLILDDVDKVEQLRALAGSCEWFGLGSRIIITTRDKQLLASRGIQRIYDVKGLSADESLQLIKRHGFKGLTGDLDHYKDVLNRAIKYSCGLPLALEIIGSNLCDKRVDEWTSALDEYERIPDEDVFKVLKLSYDALSREQHKEIFLDLACFFNGEKLGDVVNMMMSFRGVEPTHAINVLTDKSLIKIKEDRVIMHDLIEDMGKEIVRQQSRKEPGKRNRLWCYEDILDVLQNNTGTDEIEVIILDLPKDKEIQWNGKAFKKMKKLKVLVIKNASFSEGIKYLPNSLCVLEWKGYPFKYLPSNFHPTKVVHLDLSNSCVVPQLFDKKLQSLSRVNISNCKVLSEIQDLSEVPNLTELRLDGCINLTKIHDSLGFLGKLKRLSAMRCKNLKTLPPRIKLTSLEHLNLFGCSSLKSFPEISDKMEKLKTLDLESTAIESLPSSICNLVGLESLNMEACPDLKQLPAKN 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4606g00035 764 Gene3D - 181 344 IPR027417 -
Pral4606g00035 764 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 762 IPR044974 GO:0006952
Pral4606g00035 764 SUPERFAMILY "Winged helix" DNA-binding domain 423 530 IPR036390 -
Pral4606g00035 764 PRINTS Disease resistance protein signature 293 307 - -
Pral4606g00035 764 PRINTS Disease resistance protein signature 387 401 - -
Pral4606g00035 764 PRINTS Disease resistance protein signature 694 710 - -
Pral4606g00035 764 PRINTS Disease resistance protein signature 217 232 - -
Pral4606g00035 764 SMART AAA_5 214 352 IPR003593 GO:0016887
Pral4606g00035 764 Gene3D Ribonuclease Inhibitor 721 764 IPR032675 -
Pral4606g00035 764 Gene3D Ribonuclease Inhibitor 529 720 IPR032675 -
Pral4606g00035 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Pral4606g00035 764 Gene3D - 351 436 IPR042197 -
Pral4606g00035 764 Gene3D - 8 180 IPR035897 -
Pral4606g00035 764 SUPERFAMILY L domain-like 540 762 - -
Pral4606g00035 764 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral4606g00035 764 Pfam NB-ARC domain 209 422 IPR002182 GO:0043531
Pral4606g00035 764 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral4606g00035 764 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral4606g00035 764 Pfam TIR domain 16 184 IPR000157 GO:0007165
Pral4606g00035 764 SMART till_3 15 155 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4606g00035 Pral-Chr4606 332075 336036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4606g00035 16 762 WRKY Transcription Factor Family AT4G12020 31.865 3.96e-88 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4606g00035 - - pcin:129295352 998.808