Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4606g00032 ATGGCGCAAGGAGCAGGATCTTCTTCCGTCACCCGCAGATGGAGTTATGATGTGTTTTTAAGCTTTCGGGGGGAAGATACTCGCCTGACTTTCGTCGGTCATCTCTATGAGTCTCTTCGTCAAAGAGGGATTCGGACCTTCATTGATGATGAATCCCTTGATGCAGGCAAAGAAATCCGACCATCTCTTTCTGAAGCCATCAAGGAATCCAGGATGGCTATCATACTTTTCTCCCAAAACTATGCAACCTCAACCTTCTGTCTGGATGAACTTGTCCAGATTATTGAGTGTTTCAAAGAAGAAAGTCGGATGGTATATTCAGTGTTTTATCATGTGGATCCATCAGATGTGCGACATCAGAGAGGGTGTTATGGACAAGCTTTGGCTGATCTGCAGAACAGATTGGAGGGAAAGGATGTGAAGTTGCAAAAGTGGAGGTGGGCTTTGACTCAAGCAGCTGACTTGTCAGGCTGGCATTTTCAACCTGGGATTACAAAAGAACAGGAGCATATTAAGATGATTACTCGTGAAGTCTCTGCCAAGATTAATCACACTCTTTTAGAAGTTGTGGATTATCCAGTTGGCCTTGAGTTTCGGGGGAAAGAAGTAATCTCACTTCTAGATCTTGGGTCCAACAAAAACCCACTGATGATTGGAATTTGTGGCATTGGTGGGATAGGTAAATCGACAATTGCAAGAGCCGTGTATAACTCAGTTGCTGATAATTTTGATGGTTTGTGTTTTCTTTCTAATGTTAGAGAAATTTCTTACAAGCATGGCTTGTCACATCTTCAAGAGACATTACTTCATAAATTGGTGAGGGTGAAGGAACTCAAATTGGGTGATTTCTATGAAGGAATTTCAATAATAAAGAATAGGCTCCAAAACAAGAAGATTCTTTTAATTCTTGATGATGTTGACAAAGTGGAGCAATTACGAGCATTAGCTGGAAGCTGTGAATGGTTTGGCCTAGGAAGCAGAATCATTATCACGACAAGGGATAAACAGTTGCTAGCAAGTCGGGGAATTCAAAGAATTTATGATGTCAAGGGGTTAAGTGATGATGAATCTCTTCGGTTAATTAAAAGGCATGGCTTTAAAGGGCTTACGGGGGATTTAGATAATTACATGGATGTTCTGAATCGTGCCATAAAATATTCATGTGGCCTTCCATTAGCCTTGGAAATGATTGGCTCTAACTTGTGTGATAAAAGAGTTGATGAATGGACTTCTGCATTAGATGAATATGAAAGAATACCTGATAAAGACGTTTTTAAAGTCCTTAAATTAAGCTATGATGCTTTAAGCAGAGAACAGCATAAGGAAATTTTTCTTGACTTGGCCTGTTTCTTTAATGGTGAGAAGTTGGGAGACGTCATAAATATGATGATGAGTTTTCGTGGTGTTGAACCAACACATGCCATTAATGTGTTGACAGATAAATCTCTAATAAAGATTAAAGAAGATCGTGTGATAATGCATGACTTGATTGAAGATATGGGTAAGGAAATTGTTCGGCAACAATCACGAAAAGAGCCTGGGAAACGCAACAGGTTATGGTGTTATGAAGACATTATTGATGTGTTGCAAAATAACACGGGCACTGATGAAGTTGAAGTCATGATTCTTGACTCACCCAAAGATAAAGAAATCCAATGGAATGGCAAGGCATTCATGAAAATGAAGAAGCTCAAAGTGCTTGTCATAAAGAATGCAAGCTTTTCTAAAGGCATCAAATATCTCCCAAATAGTCTCTGCGTGTTAGAATGGAAGGGGTACCCTTTTGAGTTTTTGCCATCTAATTTTCATCCAAAAAAACTCGTCCATCTTGATTTGTCCAATAGTTGTGTGGTGCTCCTACCTTTTAATAAGAAATTGGAGAGTTTAAGTTGCATGAATTTTAGCAACTGTAAATCCTTGAGCCAATTACCAAACCTGTCGGGAGTTCCTAATTTAACAGAATTGTGGCTTGATGGTTGTACAAACTTAATTGAAATCCATGATTCCCTTGGATTCTTGGGTAAACTCAAAAGATTGAGTGCTATGCGATGCAAAAACTTGAGGACTTTGCCTCCTAGTATTAAGCTAATATCACTTGAAGATCTAAATCTCTTTCGTTGTTCAAGTCTTCAAAGTTTTCCTGAGATATTAGACAAGATGGAGAAGTTGAAGGCACTTGATTTGGAGAGTACGGGCATTGCAATACTGCCATCTTCAATCTGCAACCTCGTTGGGCTTGAAACCTTAAACATGGAGGCGTGCCCTAATCTTAAGCAATTACCAGCTAGTATTTGTAAGTTGCCAAAACTATTGGAACTATCAACAAATTTTTGTGAAGGGATGAAGCATTTCAGGAAATGCGAAGGTGAAAAAGAAGCAAGCTTAGACAGCGCAACCATTTCGACCAAAGAGATAGAGAAAGAATGCAACTTAGCCTTGTCTTCAAGAAGACATTTCTGTTTCTCAAATTGCAACTTAACAAATGACTCTCTTGCTCTTTGTGTCTCTCGTATTCCTGACGTTGTACAGTTAGATTTAAGGTTTAATAGTTTCACAACTCTCCCAGCATGCATAGAAGAATGTGAGAATTTAAGGTATCTTTTCTTGGATCATTGTGTGCAATTGCAAAAAATTGTGAGGATGCCACCAAAATTGGAAGCATTCAGGGCCATAGGTTGCACTTCTTTGTCTAAGTCATCCAAAAAAAGAGTATTGGATCAGGCATTCTACTTTGGAAATGGGAAAAGAAACTTTATCTTGCCAGGAAAAAGAATCCCTCAATGGCTTGACTATTATAGTCGAGGAAGCTCCGTGTCTTTTTGGATTCGTGATAAGGTCCCAAAATTTGCTCTTTGGTTTCTTTTTGAAAATGACCCAGTTGGTCCTTACAAATGTGTATTCTCAATGCACATCAATGATACCAAGTTACATATTTCTTCTGGGTGGCTTTCAAAATCAGTTATACTGGCCAATCATATATACATATGTGATATGGAAAGCATAATTGAGAAGGTTAGACCCCGTCTTGCAAATGGATGGAATCATGTGAGGGTTTCAATCAAGAGCAAAGCACGAAAGATAAAAATGGAAAAAGAAATTTCTATAGCAGTTCATGTATACAGGCAACAAAATGACTTGGAAAATATTCGATTCAAGGACACTAGAATACACCTTGATTGCAACTCGTGGCAAAAGAAACAACCACCACCTCAAGATTGGGGAGAGCTCGAAGATGAAATCAATGAGGATTCAAATTCAACAAAATTTGCAGAGTCAATCCAAAAAATCACGCCTTATCAAGCAGAACCCATGAGTGCTGACCTTGTGAGTGGAGCGTTTGATTGGCTGGCGCAAGGAGCAGGAACTTCTTCTATCGCCTGCATGCAAGGAGCAAGAGCCGTCTTCAGCTTGTGGGCAGATCCCCGCTCCTGTTTCAGGGGTGATCTCTACCCATTTCTTAGTGGAGGCGTGATTCGTCTCTTCGTTCCTGACATCCTCAACTCAGACGAAGAAACCCAACTGTTCCCTTCCAGACGCATCAAGGAAACCATGATGGCCATCACGGTTTTCTCCAAAATCTATGCAACCTCAACCATCTGTGTGGATGAAATTGTCCAGATTATGAAGTATTTTGAAAAAGAAAGTCGGCGGCTATCTTCAATGTTTTATTATGTGGATCCATCAGAGTTGCCACCTCAGACAGCTCGTCACGGACGAGCTCTTCCTAATTTGCGCAAAATATCGGATGAGATTTATCATCGTTGGCTTTGGTTGCGTGAAGAAGCTAAGGAGTCACGCAGGCTTCGATTCGTGCGTCGCTTTGCATCGCTGGCCATCATCGCCATGTTGTGGGATTCAGTTTCGGAGATGGTCTTTAACCGGAAGCGATAG 3891 0.4025 MAQGAGSSSVTRRWSYDVFLSFRGEDTRLTFVGHLYESLRQRGIRTFIDDESLDAGKEIRPSLSEAIKESRMAIILFSQNYATSTFCLDELVQIIECFKEESRMVYSVFYHVDPSDVRHQRGCYGQALADLQNRLEGKDVKLQKWRWALTQAADLSGWHFQPGITKEQEHIKMITREVSAKINHTLLEVVDYPVGLEFRGKEVISLLDLGSNKNPLMIGICGIGGIGKSTIARAVYNSVADNFDGLCFLSNVREISYKHGLSHLQETLLHKLVRVKELKLGDFYEGISIIKNRLQNKKILLILDDVDKVEQLRALAGSCEWFGLGSRIIITTRDKQLLASRGIQRIYDVKGLSDDESLRLIKRHGFKGLTGDLDNYMDVLNRAIKYSCGLPLALEMIGSNLCDKRVDEWTSALDEYERIPDKDVFKVLKLSYDALSREQHKEIFLDLACFFNGEKLGDVINMMMSFRGVEPTHAINVLTDKSLIKIKEDRVIMHDLIEDMGKEIVRQQSRKEPGKRNRLWCYEDIIDVLQNNTGTDEVEVMILDSPKDKEIQWNGKAFMKMKKLKVLVIKNASFSKGIKYLPNSLCVLEWKGYPFEFLPSNFHPKKLVHLDLSNSCVVLLPFNKKLESLSCMNFSNCKSLSQLPNLSGVPNLTELWLDGCTNLIEIHDSLGFLGKLKRLSAMRCKNLRTLPPSIKLISLEDLNLFRCSSLQSFPEILDKMEKLKALDLESTGIAILPSSICNLVGLETLNMEACPNLKQLPASICKLPKLLELSTNFCEGMKHFRKCEGEKEASLDSATISTKEIEKECNLALSSRRHFCFSNCNLTNDSLALCVSRIPDVVQLDLRFNSFTTLPACIEECENLRYLFLDHCVQLQKIVRMPPKLEAFRAIGCTSLSKSSKKRVLDQAFYFGNGKRNFILPGKRIPQWLDYYSRGSSVSFWIRDKVPKFALWFLFENDPVGPYKCVFSMHINDTKLHISSGWLSKSVILANHIYICDMESIIEKVRPRLANGWNHVRVSIKSKARKIKMEKEISIAVHVYRQQNDLENIRFKDTRIHLDCNSWQKKQPPPQDWGELEDEINEDSNSTKFAESIQKITPYQAEPMSADLVSGAFDWLAQGAGTSSIACMQGARAVFSLWADPRSCFRGDLYPFLSGGVIRLFVPDILNSDEETQLFPSRRIKETMMAITVFSKIYATSTICVDEIVQIMKYFEKESRRLSSMFYYVDPSELPPQTARHGRALPNLRKISDEIYHRWLWLREEAKESRRLRFVRRFASLAIIAMLWDSVSEMVFNRKR 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4606g00032 1296 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral4606g00032 1296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 447 IPR027417 -
Pral4606g00032 1296 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral4606g00032 1296 Gene3D Ribonuclease Inhibitor 712 906 IPR032675 -
Pral4606g00032 1296 SMART AAA_5 214 352 IPR003593 GO:0016887
Pral4606g00032 1296 Pfam TIR domain 1148 1273 IPR000157 GO:0007165
Pral4606g00032 1296 Pfam TIR domain 16 184 IPR000157 GO:0007165
Pral4606g00032 1296 Gene3D - 8 181 IPR035897 -
Pral4606g00032 1296 Gene3D - 1135 1291 IPR035897 -
Pral4606g00032 1296 Pfam NB-ARC domain 203 420 IPR002182 GO:0043531
Pral4606g00032 1296 Gene3D - 182 344 IPR027417 -
Pral4606g00032 1296 PRINTS Disease resistance protein signature 217 232 - -
Pral4606g00032 1296 PRINTS Disease resistance protein signature 624 640 - -
Pral4606g00032 1296 PRINTS Disease resistance protein signature 293 307 - -
Pral4606g00032 1296 PRINTS Disease resistance protein signature 387 401 - -
Pral4606g00032 1296 SMART till_3 15 155 IPR000157 GO:0007165
Pral4606g00032 1296 SUPERFAMILY Toll/Interleukin receptor TIR domain 1144 1247 IPR035897 -
Pral4606g00032 1296 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral4606g00032 1296 SUPERFAMILY "Winged helix" DNA-binding domain 423 530 IPR036390 -
Pral4606g00032 1296 SUPERFAMILY L domain-like 541 895 - -
Pral4606g00032 1296 Gene3D - 351 436 IPR042197 -
Pral4606g00032 1296 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 790 IPR044974 GO:0006952
Pral4606g00032 1296 Gene3D Ribonuclease Inhibitor 508 711 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4606g00032 Pral-Chr4606 306578 313917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4606g00032 16 784 WRKY Transcription Factor Family AT4G12020 31.368 3.42e-82 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4606g00032 - - pcin:129295352 1226.85