Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4606g00014 ATGAAGAGGATAATATCCGGTTTCTCGCAGCAACAGGCGAAGACAGGGCAATCTCCAGCAGCCGCAATGGTTCTCAAGACGGAGCTCTGTCGATTTAGTGGGGGCAAGATCTACCCTGGGAAAGGCATCAGATTCGTTCGATCTGATTCTCAGGTCTTTCTGTTTGCAAACTCAAAATGCAAAAGGTACTTCCACAACAGGTTGAAGCCGTCAAAGCTCACCTGGACTGCCATGTACAGGAAACAGCATAAGAAGGACATTGCCCAAGAAGCTGTTAAGAAGAGGCGTCGCGCCACCAAAAAGCCGTACTCAAGGTCTATTGTCGGTGCTACTCTGGAAGTGATCCAGAAGAAGAGAACCGAGAAACCAGAGGTCAGAGATGCTGCCAGAGAAGCTGCCCTTCGTGAGATTAAAGAAAGAATCAAGAAGACAAAGGACGAGAAGAAAGCGAAGAAGGCCGAAGTGATGGCCAAGGCACAAAAAGCACAAGGGAAAGGAAATGTTCCCAAGGGTGCTGCCCCTAAAGGTCCCAAGCTTGGGGGAGGTGGTGGAAAGCGCTAA 561 0.4955 MKRIISGFSQQQAKTGQSPAAAMVLKTELCRFSGGKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKAQKAQGKGNVPKGAAPKGPKLGGGGGKR 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4606g00014 186 FunFam 60S ribosomal protein L24 25 86 - -
Pral4606g00014 186 Pfam Ribosomal protein L24e 26 89 IPR000988 -
Pral4606g00014 186 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 28 80 - -
Pral4606g00014 186 Gene3D Ribosomal protein L24e 25 86 IPR038630 -
Pral4606g00014 186 SMART 4TRASH 30 68 IPR011017 -
Pral4606g00014 186 MobiDBLite consensus disorder prediction 139 158 - -
Pral4606g00014 186 Coils Coil 134 165 - -
Pral4606g00014 186 Gene3D - 91 161 - -
Pral4606g00014 186 PANTHER 60S RIBOSOMAL PROTEIN L24 26 178 IPR000988 -
Pral4606g00014 186 CDD Ribosomal_L24e_L24 25 78 IPR000988 -
Pral4606g00014 186 MobiDBLite consensus disorder prediction 139 186 - -
Pral4606g00014 186 ProSitePatterns Ribosomal protein L24e signature. 32 49 IPR023442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4606g00014 Pral-Chr4606 173152 175574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4606g00014 23 179 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 86.624 8.66e-90 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4606g00014 K02896 - thj:104827494 231.876