Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4606g00009 ATGGCTTTCGATTCTAAAGATCAGAATCTTCTAAACGAAGAAGAAGATTCCTACGGTCTTTCTGCCATGCTTCAGTGTTGTAGCCAGACCTACTGTGCAGTTCTTAAAGCGTCCATTGAGCTCAACTTGTTTGAGATCATAGCTAAGGAAGGAGGACGACACGTGTCAGCCTCTGAAGTAGCTTCAAAGCTTCCAAGTTCATCTCAGCACAAAGATTTAGCTTTCAGAATCGATCGTCTCTTGAGGCTTCTTGCAAGTCACTCTCTTCTGAACTGTTCGTTTCGTGAGAAGGAAGATGGAGGCACTGAGAGGCTCTATGCGATTTCTCCTGTGGGAAAGTACTTCGTCGGTGGGGACGATAATGGAGGGTTCTTGGCTCTCTTCTCATCATTCATATGTCATAGGGCCCTCCTGGATGCCTGGATGAATTTTAAGGTTGCCATAATAGAAGAAGACAATGACTTATTCAAGAAAGTTCATGGAATGCCAATGTACCAATATGCAGAGATAGATCCAGCATGGAACAACATTTTCAACAAAGCAATGGCTAACCGCTGCAACGTAGAGATGAGAAGAATATTAGAAATATACAAAGGATTTGAAGGAACATCAACACTTGTTGACGTTGGAGGTGGCACTGGCCAAAACCTCAAAATGATTGTCTCCAAGTACCCTTCAATTAAGGGCATCAATTTTGATTTGCCCAATGTTGTTCAAAACGCACCACCTCATCCGGGGATCGAGCATGTTGGAGGGGATATGTTTGAGAGTGTTCCGAAAGGTGATGTCATTATGTTGAAGGCCGTATGCCACAATTGGTCAGATGAGAATAGCATAAAATTGTTGAGGAAGTGCCATGAAGCATTGAGAGATAAAGGGAAGGTGGTAGTGATTGAGTACATAATGCCTGAAGTAATTGAAGCAACCGAAGAAGCCAAGTTCGTAGCAAGCTTGGACAACATCATGTTCCTTCATGATGGAAGAGAAAGAACTGAGAAGGAATTTCAATATCTTTGCAAATGTTCTGGCTTTTCTGCTTTCAAACTCGCTTCTCGTGCTTTCTCCGCTTTAGGAGTTATGGAATTCTACAAGTAA 1095 0.4256 MAFDSKDQNLLNEEEDSYGLSAMLQCCSQTYCAVLKASIELNLFEIIAKEGGRHVSASEVASKLPSSSQHKDLAFRIDRLLRLLASHSLLNCSFREKEDGGTERLYAISPVGKYFVGGDDNGGFLALFSSFICHRALLDAWMNFKVAIIEEDNDLFKKVHGMPMYQYAEIDPAWNNIFNKAMANRCNVEMRRILEIYKGFEGTSTLVDVGGGTGQNLKMIVSKYPSIKGINFDLPNVVQNAPPHPGIEHVGGDMFESVPKGDVIMLKAVCHNWSDENSIKLLRKCHEALRDKGKVVVIEYIMPEVIEATEEAKFVASLDNIMFLHDGRERTEKEFQYLCKCSGFSAFKLASRAFSALGVMEFYK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4606g00009 364 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Pral4606g00009 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 364 IPR016461 GO:0008168
Pral4606g00009 364 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Pral4606g00009 364 SUPERFAMILY "Winged helix" DNA-binding domain 14 120 IPR036390 -
Pral4606g00009 364 Gene3D - 32 193 IPR036388 -
Pral4606g00009 364 FunFam Caffeic acid O-methyltransferase 119 364 - -
Pral4606g00009 364 Pfam O-methyltransferase domain 141 345 IPR001077 GO:0008171
Pral4606g00009 364 PANTHER O-METHYLTRANSFERASE 32 354 IPR016461 GO:0008168
Pral4606g00009 364 Gene3D Vaccinia Virus protein VP39 175 351 IPR029063 -
Pral4606g00009 364 CDD AdoMet_MTases 205 302 - -
Pral4606g00009 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 351 IPR029063 -
Pral4606g00009 364 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4606g00009 Pral-Chr4606 133436 136516 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4606g00009 15 364 Monolignol Biosynthesis Gene Families AT5G54160 45.739 2.94e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4606g00009 - - pcin:129312384 451.055