Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4606g00004 ATGGCAAAGAGGAAGAGCTGGTTTGGTTTCGTGAAGAGGCTGTTTGTATGGGACGCACAGTCCAAACCAGAGAAGAAAGAGAAAAGAAGGAAATGGATCTTTGGAATTGGAAGGCTAAAGATAAAGAGATTACCTTCTATTACAGCTCCACCAGCAACACAAAAAGAAACAAAACAAGAGGTTGAAAAGCTCAATAATGGCAATCAATGTTACGAAGAAACTGAAGAATTACAAATTGTTAACTCCAGAATTGAGGCTCCTCAACCCACATCACAATGCCATGGCAAGATTGAAGAATCTTCAGCCATCAAAATTCAAACTACCTTTCGGGGTTATCTTGCAAGGAAGGCTCTAAGGGCATTGAAGGGAATAGTGAAGCTACAAGCTATCATTAGAGGCAGAGCAGTAAGGCGGCAAACTATGAGCACCCTCAAGTGCTTGCAGTCACTCGTTGATATCCAGTCACAGGTCTGTGCCAAGAGACTCCAAATGGTTAAGGGAAGATGGGATTATGATGAAAACCAAGAGATTCCAAGTTCAAGGGACAAGATAATCAGGATGGATTCAAACGGTGAAAGGAGGTGGGATGACAGCATTTTGTTGAAGGAAGAGACAAATGTTTCTCACATGAGCAAAAAAGAAGCAGAAATTAAGAGAGAACGAATGAAAGAATACTCGTTCAATCATCGAAGATCAGCAGAATCAGAGAGAAAGAAGGTAAATGGAAGATTGAGGTATTGGATGGAGCAGTGGGTAGATACTCAACTTTCCAAAAGTAAAGAACTTGAGGATCTGGATTCAGTTTACAGTTCACATTACGGAGCAGGGGAAGAAGATGGAAGAACAGGAAGAAGACAGCTACTTCTGAGAAATATTCAGAGTCAAAGGCAAAATCAGATTGAAGGCCTAGGCCTATATTCTCCAAAACTTGCTCCAGTAAGAAAACTTTCTCCTCACAGAAGGCAACATTCTCTGGGAAATGATGAGCTTTCAAGCCCTTCTGTACTTCCCCCATACATGGCAGCAACAGAATCAGCCAGAGCAAAAGCAAGATCTTCAAGCTCCCCAAAACTAAGAACGGTGAATGTGGATCCAACAAAACTTGATGGGAACTCACCATGCAAAAAGAAGCTATATTTTGTATCTTCTTCCATTAACCAGCCAAGATCTCCAAGTTTAAAGGCAGTCTCAGGACCTATTAGAGCAAGCAGGACAATGAAGGATCTCAGCATCAACTCTGATAGCTCATTTCTGTACGGATACAATAGAGATTGGGATGGGCCAGGTATTTTCAAATGA 1299 0.4157 MAKRKSWFGFVKRLFVWDAQSKPEKKEKRRKWIFGIGRLKIKRLPSITAPPATQKETKQEVEKLNNGNQCYEETEELQIVNSRIEAPQPTSQCHGKIEESSAIKIQTTFRGYLARKALRALKGIVKLQAIIRGRAVRRQTMSTLKCLQSLVDIQSQVCAKRLQMVKGRWDYDENQEIPSSRDKIIRMDSNGERRWDDSILLKEETNVSHMSKKEAEIKRERMKEYSFNHRRSAESERKKVNGRLRYWMEQWVDTQLSKSKELEDLDSVYSSHYGAGEEDGRTGRRQLLLRNIQSQRQNQIEGLGLYSPKLAPVRKLSPHRRQHSLGNDELSSPSVLPPYMAATESARAKARSSSSPKLRTVNVDPTKLDGNSPCKKKLYFVSSSINQPRSPSLKAVSGPIRASRTMKDLSINSDSSFLYGYNRDWDGPGIFK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4606g00004 432 PANTHER IQ-DOMAIN 5-RELATED 4 393 - -
Pral4606g00004 432 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Pral4606g00004 432 MobiDBLite consensus disorder prediction 347 367 - -
Pral4606g00004 432 Pfam Protein of unknown function (DUF4005) 323 383 IPR025064 -
Pral4606g00004 432 MobiDBLite consensus disorder prediction 315 368 - -
Pral4606g00004 432 SMART iq_5 97 119 IPR000048 GO:0005515
Pral4606g00004 432 Pfam IQ calmodulin-binding motif 100 119 IPR000048 GO:0005515
Pral4606g00004 432 Gene3D - 96 149 - -
Pral4606g00004 432 Coils Coil 54 74 - -
Pral4606g00004 432 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4606g00004 Pral-Chr4606 22693 26107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4606g00004 1 417 IQD Protein Family AT5G13460 43.340 4.72e-96 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4606g00004 - - lang:109325242 466.077