Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4604g00016 | ATGGATGATGGAGATATTCAGCTTTCAGATAATGCTATGCTGTTGAATACAGAATCATCCAGTGATTTCCAGGCGCTAACATCCATGAACATGATGAATGGATCATTCACCAAGACCATGACTTGCACACACACACACACTTGTAACCCTCCCGGCCCAAATGCTGTACATACACACACTTGCTATCACACTCACACACAAGTTTTTGCACCAGAACCAGATGACAAAGAGCATACCAAATCAAAGGCAAGAAGGCCTTCAACTAACAGAGAAGCAGTTAGAAAGTATAGGGAGAAGAAGAAGGCGCACACAGCTTATCTGGAGGAGGAAGTCAAGAGATTGCATCTGCAGCATGTGCAACTAGTCAGGAAACTGCAGAAGCAGGCGATTCTTGAGGCCGAGTTATCAAGGTTGAGAAGCATTTTGATAGATCTTAGGAGGAAAATTGACAATGAATTAGGTGTTTTCCCTTATAAGCAGTGTGCCTCTTATGGTCAGACCAATTTCCCATGCTTCAATAGTCCGCATGTAGGATCATCATCTCAAGTTGCCATATGTGGAAATGGAAAATTTGCTTCTCGACGGGAAGGAAATTGTCAACCTGCCATAGATTGTCAAGTAAACGTAGATAACAAGGCAAGCACTGAAGAAGAAGAAGAAAGCATTGAAGGCGATGGATAA | 681 | 0.4273 | MDDGDIQLSDNAMLLNTESSSDFQALTSMNMMNGSFTKTMTCTHTHTCNPPGPNAVHTHTCYHTHTQVFAPEPDDKEHTKSKARRPSTNREAVRKYREKKKAHTAYLEEEVKRLHLQHVQLVRKLQKQAILEAELSRLRSILIDLRRKIDNELGVFPYKQCASYGQTNFPCFNSPHVGSSSQVAICGNGKFASRREGNCQPAIDCQVNVDNKASTEEEEESIEGDG | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4604g00016 | 226 | CDD | bZIP | 82 | 136 | - | - | |
Pral4604g00016 | 226 | MobiDBLite | consensus disorder prediction | 69 | 95 | - | - | |
Pral4604g00016 | 226 | PANTHER | CCAAT/ENHANCER BINDING PROTEIN | 2 | 157 | IPR031106 | GO:0003700|GO:0006351 | |
Pral4604g00016 | 226 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 79 | 145 | IPR004827 | GO:0003700|GO:0006355 | |
Pral4604g00016 | 226 | SMART | brlzneu | 77 | 144 | IPR004827 | GO:0003700|GO:0006355 | |
Pral4604g00016 | 226 | MobiDBLite | consensus disorder prediction | 69 | 98 | - | - | |
Pral4604g00016 | 226 | Gene3D | - | 70 | 145 | - | - | |
Pral4604g00016 | 226 | SUPERFAMILY | Leucine zipper domain | 82 | 126 | IPR046347 | GO:0003700|GO:0006355 | |
Pral4604g00016 | 226 | Pfam | Basic region leucine zipper | 80 | 134 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4604g00016 | Pral-Chr4604 | 158782 | 161053 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4604g00016 | 1 | 173 | bZIP Transcription Factor Family | AT4G35040 | 45.989 | 4.48e-48 | 157 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Pral4604g00016 | bZIP_2 | 7.7e-11 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4604g00016 | K25785 | - | vvi:100255414 | 247.669 |