Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4604g00002 ATGGCTGAACCTCGTCGTAAGCGCCCCAAAATTGCCAGGGGAGAAGATGATTTTATGCCTGGAAGCATTATCGAGATCGAGCTTTTTAAGTTTATGACCTTTGACTACCTAAAATGTAAACCTGGTCCTCGTCTGAATCTTGTTATTGGACCCAATGGTTCTGGGAAGAGTTCTCTTGTTTGTGCCATTGCACTTGGTCTGGGGGGTGAGCCTCAGCTGCTAGGACGAGCAACAAGTATTGGATCATATGTGAAGCGGGGAGAAGAATCAGGTTGTATTAAGATTACATTGAGAGGGGATAGTAAAGATAAGCATATCACTGTTATTCGGAAAATAACTACTAACAACAAGTCTGAATGGTTGTTCAATGGAAAAGTAGTGCCCAAAAAGGATGTGATGGAAGTCATTCAACGGTTTAACATCCAAGTTAATAATTTGACCCAATTTTTACCCCAGGACAGGGTCTGTGAATTTGCTAAATTAACTCCTGTGCAACTTCTGGAGGAGACTGAAAAGGCTACTGGTGATCCCCAACTTCCAATCATTCACCGTTCTCTTGTTGATAAAAGCCGTGCATTGAAGCAAATTGAGCTGACAGTGACGAAAAATGAAGAAACTTTGAAACAGCTAAAGGACCTTAATGCTGAACTTGAGAAGGATGTTGAACGTGTCCGTCAAAGGGATGAACTACTTAAAAAGGTTGAGTCCATGAAAAAGAAAGTGCCATGGCTTAGATATGATATGAAGAAGGCTGAATACTTGGAAGCTAAAGAACGTGAAAATGATGCTAAAAAGAAGATGGAGGAAGCTGCAAAGATTTTAAATGATCTGAAAGAACCTATCGAGAAACAGAAAAAGAACAAGGCAGCAATGGATGCAACATGTAAAAAGGTTGCCAGCCTTATAAATGGCAATGCCATGAAGCGAATGGAACTTCTGGAGAAAGAAAACCATCTGGGTGTGGAATTACAAGGAAAATACAATGAAATGGAAGACTTGAGGAGGCAGGAAGAAACTTGTCGGCAAAGATTTTTAAAGGCTAAGGAGGAACTTGCTGCTGCTGAACGTGAACTGGAGAATCTGCCTCATTATGAACCTCCAAAGGAAGAGATTGAAAGACTAAAAGATGAAATTTTGAACTTGCAAAATTCTGCATCTCAAAAGAGGCTAGAGAAGTCAGAAACAGACAAATTTTTATATCAGAAAAAGTCATCATTGGCACAGTGTATAGACAGGTTGAGGGAGATGGATAGTAAAAATACTAAGTGTTTGCATGCGTTACGAGATTCAGGGGCAGAGAAAGTAATGGAAGCTTATAAATGGGTGCAAGATAATCGCCATTTATTCAATAAGGAAGTTTATGGTCCTGTACTGCTGGAGGTTAATGTCGCAAAGCAGACTCATGCTGCCTTCCTGGAGGGTCATGTTCCTTATTACATCTGGAGGTCTTTCATTACTCAAGATTCTGGTGATCGGGACCTTTTGGTAAAAAGTCTGAGCTCCTTTGATGTTCCAGTATTAAATTATACTGGTGATGATGGTAGTCAGAGAGAGCCATTTCAAATTTCTGAAGATATGCGTACTCTTGGTATCTACTCACGTCTTGATGAAGTTTTTGATGCTCCCACAGCTGTTAAGGAGGTTTTGATTGGACAGTTTGGTCTGGATCATTCATATATTGGAACAAGAGAAACTGATCAGAAGGCAGATTGGGTCCAAAAATTGGGCATTTTTGACTTTTGGACTCCAGATAATCACTATCGTTGGTCTAAATCTAGATATGGGAATCATGTATCAGGAGTTGTTGAACAAGTACAACGTTCGAGACTTCTTTCATACAATATAGACGCTAGAGAAATCGAGAAGCTGAGGTGTCACAGAATGGACCTTGAAGAATCTATAGAAACCTTGGAAGCAACTTCTAAAGGATTACAAGATGAGGAGAGACGCCTAAGCAATGAAGCAGCTAATCTCCGCAGACAGCGGGATGAAATAAACACTACTGTGCTTAAAGAGAAGGAAAAGCGCCGGGATATCATGCGCACTATTGAACTGAGGAAAAGGAAATTAGAGTCAGTGGCGGTGGAGGGTGATATGGATATGGTTATTGCTAAGCTGACTGATCAAGCAAGAAATTGTAATATTCAGCGATTCCATAATGCAATCAAAATTAAGAACCTACTTCTTGAGGCAATTGGTTATAGACGGAGTTATGCTGAAAAACATTTGGCTACTCTTGACTTTGATGCTAAGATTAGGGAGTCGGAGGCCAGTTTGAAGCAGCACGAGAAGCTTGGTTTGCAAGCATCCTTACACTTTGAATCCTGCAAGAAGGAGACTGAGAATTGTCGACAGCTGCTTTCAGAATGTTTGAGGCGTGCTGAATCAATTGCTCCCATCACTCCAGATCTTGAGAAGGAATTTCTTGAGATGCCCACTACTATTGAGGATTTGGAAGCTGCAATCCAAGACACCACTTCCCAAGCCAATTCTATACTTTTTGTCAATCATAATGTGTTGGAACAATATGAGAACCGTGAACGTCAGATAGGGGCTTTAGCTGCAAAACTTGAAGAAGATAAAAAGGAAGTAAGTAGGTGTCTGGCTGAAGTAGACACCCTAAAGGGGACATGGCTTCCAACGTTGAGGAACCTTGTGGCCCAGATAAATGAAACCTTCAGTCGTAATTTCGAGGAGATGGCTGTTGCAGGAGAAGTTTCACTTGATGAGCGTGATGTGGACTTTGATCAGTTTGGGATACTCATAAAAGTGAAGTTCAGACCAACAGGACAGCTTCAAGTTCTGAGTGCCCACCATCAGTCTGGAGGGGAGCGATCAGTTTCTACTATTCTTTATCTTGTTTCTCTTCAAGATCTTACCAACTGCCCATTTAGAGTGGTTGATGAGATTAATCAAGGCATGGACCCAATAAATGAAAGGAAAATGTTCCAGCAACTAGTGAGAGCTGCCAGCCAGCCAAATACACCACAATGTTTTTTGCTTACCCCAAAGTTGCTACCGGATCTGGAATACAGCGAAGTGTGCAGTATTTTAAATGTAATGAATGGGCCTTGGATTGAGAAAGTCTCGGAAGTTTGGGGTGAAGGTGATCGATGGGGGAAAATTGCAGGGTTGATGTTAGAGAATCAAAGCTGA 3156 0.4129 MAEPRRKRPKIARGEDDFMPGSIIEIELFKFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRATSIGSYVKRGEESGCIKITLRGDSKDKHITVIRKITTNNKSEWLFNGKVVPKKDVMEVIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKATGDPQLPIIHRSLVDKSRALKQIELTVTKNEETLKQLKDLNAELEKDVERVRQRDELLKKVESMKKKVPWLRYDMKKAEYLEAKERENDAKKKMEEAAKILNDLKEPIEKQKKNKAAMDATCKKVASLINGNAMKRMELLEKENHLGVELQGKYNEMEDLRRQEETCRQRFLKAKEELAAAERELENLPHYEPPKEEIERLKDEILNLQNSASQKRLEKSETDKFLYQKKSSLAQCIDRLREMDSKNTKCLHALRDSGAEKVMEAYKWVQDNRHLFNKEVYGPVLLEVNVAKQTHAAFLEGHVPYYIWRSFITQDSGDRDLLVKSLSSFDVPVLNYTGDDGSQREPFQISEDMRTLGIYSRLDEVFDAPTAVKEVLIGQFGLDHSYIGTRETDQKADWVQKLGIFDFWTPDNHYRWSKSRYGNHVSGVVEQVQRSRLLSYNIDAREIEKLRCHRMDLEESIETLEATSKGLQDEERRLSNEAANLRRQRDEINTTVLKEKEKRRDIMRTIELRKRKLESVAVEGDMDMVIAKLTDQARNCNIQRFHNAIKIKNLLLEAIGYRRSYAEKHLATLDFDAKIRESEASLKQHEKLGLQASLHFESCKKETENCRQLLSECLRRAESIAPITPDLEKEFLEMPTTIEDLEAAIQDTTSQANSILFVNHNVLEQYENRERQIGALAAKLEEDKKEVSRCLAEVDTLKGTWLPTLRNLVAQINETFSRNFEEMAVAGEVSLDERDVDFDQFGILIKVKFRPTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEVCSILNVMNGPWIEKVSEVWGEGDRWGKIAGLMLENQS 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4604g00002 1051 Coils Coil 840 863 - -
Pral4604g00002 1051 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 4 1045 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Pral4604g00002 1051 Gene3D - 22 240 IPR027417 -
Pral4604g00002 1051 Coils Coil 371 391 - -
Pral4604g00002 1051 Gene3D - 848 1010 IPR027417 -
Pral4604g00002 1051 Coils Coil 620 675 - -
Pral4604g00002 1051 Coils Coil 193 234 - -
Pral4604g00002 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 994 IPR027417 -
Pral4604g00002 1051 FunFam Structural maintenance of chromosomes 5 847 1018 - -
Pral4604g00002 1051 Coils Coil 250 277 - -
Pral4604g00002 1051 Coils Coil 330 357 - -
Pral4604g00002 1051 Pfam RecF/RecN/SMC N terminal domain 24 991 IPR003395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4604g00002 Pral-Chr4604 29136 44889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4604g00002 1 1042 Structural Maintenance of Chromosomes family AT5G15920 64.587 0.0 1385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4604g00002 K22803 - qsa:O6P43_001392 1555.81