Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4603g00054 ATGTCTACCCAGGACCAACCACTCTTACACGGCTCACGCGAGGAGGAGGCGACTGAAACCGCCTATGATTCGTCGGAGAAGATCGTTGTCGTCGGGGTTGCCGACGCCGACGCCGACGATTTCGGTCGGGCGCCACCGTTCTCATGGAAGAAGCTCTGGCTTTTCACTGGCCCTGGCTTTCTCATGAGCATCGCGTTTCTCGATCCTGGGAATTTGGAGGGTGATCTTCAGGCTGGTGCTGTTGCTGGCTACTCACTTCTATGGCTCCTCATGTGGGCGACGGCTATGGGGCTTCTCGTTCAGCTCCTGTCCGCCAGGCTCGGCGTCGCCACCGGAAGGCACTTGGCTGAGCTCTGCCGAGAGGAGTACCCCACGTGGGCCATGATGGTGTTGTGGTTTATGGCGGAGGTGGCTCTAATTGGGGCTGACATCCAAGAGGTTATTGGAAGTGCTATTGCTATTAGGATTCTAAGTAACGGATTTGTGCCTCTTTGGGCTGGGGTCGTCATCACAGCTTTGGATTGTTTTATTTTTCTTTTTCTGGAGAACTATGGTGTGAGGAAACTGGAAGCACTTTTTGCAGTTCTCATTGGTATAATGGCGCTTTCATTTGCGTGGATGTTTGGCGAAGCAAAGCCCGACGGCTTAAATATTCTTCTAGGTCTTTTGGTTCCAAAACTTAGTTCCAAAACAATACAGCAGGCTGTTGCAGTTGTAGGCGGCATCATCATGCCTCACAATGTGTTCTTGCATTCTGCTCTTGTTCAATCGAGACAGATTGACTCAACCAAGAAAGGACGAGTTCAAGAAGCTCTTAATTATTATACTATTGAATCCGCTGCAGCACTTGCGGTCTCGTTAGTCATTAACATATTTGTCACAACTGTGTTTGCCAAGGGTTTCTATGGTACTGAACAAGCAAATAGCGTTGGTCTTGAAAATGCAGGGCAGTATCTTCAGCAGAAGTATGGTGGTGGACTTTTTCCTATCTTATATATATGGGGTATTGGGTTATTAGCGGCTGGCCAAAGTAGCACCATTACTGGCACTTATGCCGGACAATTTATCATGGGGGGTTTTCTGAATTTAAGGTTGAAAAAATGGGTGAGGGCTTTAATTACACGAAGTTGTGCTATTATCCCAACCATGATCGTTGCTCTTGTCTTTAATTCCTCTGAGGACTCATTAGATGTCCTAAACGAATGGCTCAATATTCTTCAGTCAGTTCAGATCCCTTTTGCTCTTATTCCCTTGCTTTGCTTGGTGTCAAAGGAGCAGTTGATGGGGACTTTCAGGATTGGCGTTGTCCTCAAGATTATTTCCTGGTTTGTGGCTGCTTTAGTTATAGTCATTAATGGCTATCTGTTGGTGGAATTCTTCATCTCTGAAGTGAGTGGAGCAGTGGTTAGCACCGTAGTGTCTGTGTTCACAGTCATGTATGTTGCATTCATAATCTACCTCGCTTCACGGATGATCACCTTCTTGCCGTGGCATAGACCATGGCAAACCAAGGCAAACACTGACACGGAATTGACGAGTTGA 1542 0.4721 MSTQDQPLLHGSREEEATETAYDSSEKIVVVGVADADADDFGRAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCREEYPTWAMMVLWFMAEVALIGADIQEVIGSAIAIRILSNGFVPLWAGVVITALDCFIFLFLENYGVRKLEALFAVLIGIMALSFAWMFGEAKPDGLNILLGLLVPKLSSKTIQQAVAVVGGIIMPHNVFLHSALVQSRQIDSTKKGRVQEALNYYTIESAAALAVSLVINIFVTTVFAKGFYGTEQANSVGLENAGQYLQQKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWVRALITRSCAIIPTMIVALVFNSSEDSLDVLNEWLNILQSVQIPFALIPLLCLVSKEQLMGTFRIGVVLKIISWFVAALVIVINGYLLVEFFISEVSGAVVSTVVSVFTVMYVAFIIYLASRMITFLPWHRPWQTKANTDTELTS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4603g00054 513 MobiDBLite consensus disorder prediction 1 20 - -
Pral4603g00054 513 NCBIfam Nramp family divalent metal transporter 57 427 - -
Pral4603g00054 513 PRINTS Natural resistance-associated macrophage protein signature 235 258 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4603g00054 513 PRINTS Natural resistance-associated macrophage protein signature 186 207 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4603g00054 513 PRINTS Natural resistance-associated macrophage protein signature 404 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4603g00054 513 PRINTS Natural resistance-associated macrophage protein signature 342 361 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4603g00054 513 PRINTS Natural resistance-associated macrophage protein signature 131 157 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4603g00054 513 PRINTS Natural resistance-associated macrophage protein signature 161 180 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4603g00054 513 PRINTS Natural resistance-associated macrophage protein signature 370 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4603g00054 513 Pfam Natural resistance-associated macrophage protein 73 433 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4603g00054 513 Hamap Divalent metal cation transporter MntH [mntH]. 38 460 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4603g00054 513 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 50 428 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral4603g00054 513 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 44 489 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4603g00054 Pral-Chr4603 399225 402429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4603g00054 33 506 Inorganic Solute Cotransporters AT2G23150 77.917 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4603g00054 K21398 - gmx:100789871 791.571