Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4603g00053 ATGACTTTCTGCAAAGAGGAAGAAGAAGTGGCGGATAAGGTATCTGTTGCAGTATCATCAGGATCAATGAACAAAGAAGAAGAAGTTGCATCAGAGGGAATAGGACAGTGGTTGAGTTTAGGACTCAACGGATCTGACAAAGCTCAGGAATTGGAAGACTCTGAAATATCAAAATCATTCCGGAATAATAATAAGGTATTCTCATGCAATTTCTGCATGAGGAAGTTTTACAGTTCACAAGCCTTGGGGGGTCACCAGAATGCACACAAGAGGGAAAGAGGAGAAGCAAGAAGGAACCAATCTCATAGAATGATGATGGTGGCGTCAAGGTCACTCGGTGTCCAGCCACACTCACCTGTGCGCAAGCCAAACAGAGAAGGGTCAGGCATGGTGGCTCGACTCAGTGGTGTTAATCATGGGTTTCAAACGGCATATTGGACGCCATTTCTGGTAGAACAAGCTATGGATTTGAGTTGGCCAGGAAGTTTTCATGTGGATTTGCCAAAACAAGAATCCGATGTAAATAAGCTTGACTTAGATCTTCGGCTCTAA 552 0.4402 MTFCKEEEEVADKVSVAVSSGSMNKEEEVASEGIGQWLSLGLNGSDKAQELEDSEISKSFRNNNKVFSCNFCMRKFYSSQALGGHQNAHKRERGEARRNQSHRMMMVASRSLGVQPHSPVRKPNREGSGMVARLSGVNHGFQTAYWTPFLVEQAMDLSWPGSFHVDLPKQESDVNKLDLDLRL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4603g00053 183 Gene3D Classic Zinc Finger 45 118 - -
Pral4603g00053 183 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 183 - -
Pral4603g00053 183 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Pral4603g00053 183 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 94 IPR013087 -
Pral4603g00053 183 SUPERFAMILY beta-beta-alpha zinc fingers 63 93 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4603g00053 Pral-Chr4603 362536 363127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4603g00053 38 174 C2H2 Transcription Factor Family AT1G24625 37.584 3.57e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4603g00053 - - ccaj:109809498 199.904