Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4603g00045 | ATGAATATGGTCATTGATAGCCGTAAGGACATGGATCGGATCAAGGGCCCCTGGAGCCCCGAAGAGGACGACGCCTTGCAGAAGCTGGTGGAAAAGCACGGACCTAGGAATTGGTCGCTGATCAGCAAGTCGATTCCAGGTCGGTCCGGCAAGTCTTGTCGGCTCAGATGGTGTAATCAGCTCTGTCCTCAGGTGGAGCACCGACCCTTCTCGCCGGAAGAGGATGAGACTATCATGCGGGCTCATGCCCGATTCGGCAATAAATGGGCAACCATAGCCCGGCTTCTATCGGGTCGAACCGATAACGCCATCAAGAACCACTGGAACTCCACCTTGAAGCGCAAGTGCGCGTCCATGATGATGGACGAATCCGCCGCTGGGGCCGGTGGATTCGATGGCAGTTTCAGCCCCCAGCCACTGAAGAGATCGGTGAGTGCCGGAGCTGCTATGCCGGTGTCGAACGGGTTTTTCGGAAACCAGCAGACGCCGGGTAGCCCCTCCGGATCCGACGTCAGTGATTCCAGTGTGCCAGTAGCTTCTTCTTCCCATGTTTACCGGCCTGTGGCGAGAACCGGCGGAGTTCTACCTCCCGTAGAAACGACGTCGTCATCGAATGAACCTACTACTTCATTATCCCTATCACCTCCTGGAGTCGACTCTTCAGAAGTCTCGAATCGTGCTTCAGAGTCAACACATGCTGCATCTCTAGCGAATACTGTGCGTTTGTTACCGGCAATGGTCTCAGCCGCGGTGTCGTCCGCAGCTCCGCTGCTGCCTCCCGCAGGCGCAGCGATGTCGGTGCAGCAGCAGGTTCATTTAGGCCTGAGCGATCGGAGGAGCGGTGACGGCTTGTCATCGGCGGCGAACCCTAATGGGGCGGCACCATTCAATTTCAGCGCAGAGTTACTAGCTGTTATGCAGGAGATGATAAAGACGGAGGTGAGGAGTTATATGGCGGGACTAGAAAAGAGGCAGCTCATGGATTTGCGAACGCTGCAGTGA | 1002 | 0.5629 | MNMVIDSRKDMDRIKGPWSPEEDDALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLCPQVEHRPFSPEEDETIMRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMMMDESAAGAGGFDGSFSPQPLKRSVSAGAAMPVSNGFFGNQQTPGSPSGSDVSDSSVPVASSSHVYRPVARTGGVLPPVETTSSSNEPTTSLSLSPPGVDSSEVSNRASESTHAASLANTVRLLPAMVSAAVSSAAPLLPPAGAAMSVQQQVHLGLSDRRSGDGLSSAANPNGAAPFNFSAELLAVMQEMIKTEVRSYMAGLEKRQLMDLRTLQ | 333 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4603g00045 | 333 | FunFam | Transcription factor MYB44 | 69 | 115 | - | - | |
Pral4603g00045 | 333 | CDD | SANT | 69 | 112 | IPR001005 | - | |
Pral4603g00045 | 333 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Pral4603g00045 | 333 | Gene3D | - | 14 | 66 | - | - | |
Pral4603g00045 | 333 | PANTHER | MYB PROTEIN-RELATED | 15 | 210 | - | - | |
Pral4603g00045 | 333 | Gene3D | - | 68 | 127 | - | - | |
Pral4603g00045 | 333 | SUPERFAMILY | Homeodomain-like | 12 | 108 | IPR009057 | - | |
Pral4603g00045 | 333 | MobiDBLite | consensus disorder prediction | 154 | 181 | - | - | |
Pral4603g00045 | 333 | MobiDBLite | consensus disorder prediction | 154 | 230 | - | - | |
Pral4603g00045 | 333 | FunFam | MYB transcription factor | 15 | 66 | - | - | |
Pral4603g00045 | 333 | SMART | sant | 66 | 114 | IPR001005 | - | |
Pral4603g00045 | 333 | SMART | sant | 14 | 63 | IPR001005 | - | |
Pral4603g00045 | 333 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Pral4603g00045 | 333 | ProSiteProfiles | Myb-like domain profile. | 10 | 61 | IPR001005 | - | |
Pral4603g00045 | 333 | Pfam | Myb-like DNA-binding domain | 18 | 76 | - | - | |
Pral4603g00045 | 333 | CDD | SANT | 17 | 59 | IPR001005 | - | |
Pral4603g00045 | 333 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 10 | 65 | IPR017930 | - | |
Pral4603g00045 | 333 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 67 | 116 | IPR017930 | - | |
Pral4603g00045 | 333 | MobiDBLite | consensus disorder prediction | 196 | 230 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4603g00045 | Pral-Chr4603 | 277596 | 279140 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4603g00045 | 12 | 323 | MYB Transcription Factor Family | AT5G67300 | 54.603 | 2.04e-98 | 291 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Pral4603g00045 | Myb_DNA-bind_6 | 1.7e-18 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4603g00045 | K09422 | - | qsa:O6P43_024595 | 416.001 |