Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4603g00045 ATGAATATGGTCATTGATAGCCGTAAGGACATGGATCGGATCAAGGGCCCCTGGAGCCCCGAAGAGGACGACGCCTTGCAGAAGCTGGTGGAAAAGCACGGACCTAGGAATTGGTCGCTGATCAGCAAGTCGATTCCAGGTCGGTCCGGCAAGTCTTGTCGGCTCAGATGGTGTAATCAGCTCTGTCCTCAGGTGGAGCACCGACCCTTCTCGCCGGAAGAGGATGAGACTATCATGCGGGCTCATGCCCGATTCGGCAATAAATGGGCAACCATAGCCCGGCTTCTATCGGGTCGAACCGATAACGCCATCAAGAACCACTGGAACTCCACCTTGAAGCGCAAGTGCGCGTCCATGATGATGGACGAATCCGCCGCTGGGGCCGGTGGATTCGATGGCAGTTTCAGCCCCCAGCCACTGAAGAGATCGGTGAGTGCCGGAGCTGCTATGCCGGTGTCGAACGGGTTTTTCGGAAACCAGCAGACGCCGGGTAGCCCCTCCGGATCCGACGTCAGTGATTCCAGTGTGCCAGTAGCTTCTTCTTCCCATGTTTACCGGCCTGTGGCGAGAACCGGCGGAGTTCTACCTCCCGTAGAAACGACGTCGTCATCGAATGAACCTACTACTTCATTATCCCTATCACCTCCTGGAGTCGACTCTTCAGAAGTCTCGAATCGTGCTTCAGAGTCAACACATGCTGCATCTCTAGCGAATACTGTGCGTTTGTTACCGGCAATGGTCTCAGCCGCGGTGTCGTCCGCAGCTCCGCTGCTGCCTCCCGCAGGCGCAGCGATGTCGGTGCAGCAGCAGGTTCATTTAGGCCTGAGCGATCGGAGGAGCGGTGACGGCTTGTCATCGGCGGCGAACCCTAATGGGGCGGCACCATTCAATTTCAGCGCAGAGTTACTAGCTGTTATGCAGGAGATGATAAAGACGGAGGTGAGGAGTTATATGGCGGGACTAGAAAAGAGGCAGCTCATGGATTTGCGAACGCTGCAGTGA 1002 0.5629 MNMVIDSRKDMDRIKGPWSPEEDDALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLCPQVEHRPFSPEEDETIMRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMMMDESAAGAGGFDGSFSPQPLKRSVSAGAAMPVSNGFFGNQQTPGSPSGSDVSDSSVPVASSSHVYRPVARTGGVLPPVETTSSSNEPTTSLSLSPPGVDSSEVSNRASESTHAASLANTVRLLPAMVSAAVSSAAPLLPPAGAAMSVQQQVHLGLSDRRSGDGLSSAANPNGAAPFNFSAELLAVMQEMIKTEVRSYMAGLEKRQLMDLRTLQ 333
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral4603g00045 333 FunFam Transcription factor MYB44 69 115 - -
Pral4603g00045 333 CDD SANT 69 112 IPR001005 -
Pral4603g00045 333 MobiDBLite consensus disorder prediction 1 20 - -
Pral4603g00045 333 Gene3D - 14 66 - -
Pral4603g00045 333 PANTHER MYB PROTEIN-RELATED 15 210 - -
Pral4603g00045 333 Gene3D - 68 127 - -
Pral4603g00045 333 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Pral4603g00045 333 MobiDBLite consensus disorder prediction 154 181 - -
Pral4603g00045 333 MobiDBLite consensus disorder prediction 154 230 - -
Pral4603g00045 333 FunFam MYB transcription factor 15 66 - -
Pral4603g00045 333 SMART sant 66 114 IPR001005 -
Pral4603g00045 333 SMART sant 14 63 IPR001005 -
Pral4603g00045 333 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4603g00045 333 ProSiteProfiles Myb-like domain profile. 10 61 IPR001005 -
Pral4603g00045 333 Pfam Myb-like DNA-binding domain 18 76 - -
Pral4603g00045 333 CDD SANT 17 59 IPR001005 -
Pral4603g00045 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 65 IPR017930 -
Pral4603g00045 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 116 IPR017930 -
Pral4603g00045 333 MobiDBLite consensus disorder prediction 196 230 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral4603g00045 Pral-Chr4603 277596 279140 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4603g00045 12 323 MYB Transcription Factor Family AT5G67300 54.603 2.04e-98 291
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4603g00045 Myb_DNA-bind_6 1.7e-18 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4603g00045 K09422 - qsa:O6P43_024595 416.001