Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4603g00042 ATGATTCTCACAAAAGATGCCCAGAACTCGTTGTCCCTTGATGCGCTTCTCTGTGAGGAAGATGGTTTGACAGAGGATGGTACGGAAGGAGGGAGATATCGGGAAAAGTCTCCGTCTTTACCTTTGATTTTGTCGGACAATAATGTTTTCTTGGACGACGATGTTCTTGCTTCTCTAATCTCAAAAGAAAGAGGGACCCATTTCGGTCCGGGTAATCTATTAATCGATGAGCCTCTAAAGGAAGCTCGCGAAGAGGCTGTGTTATGGGTTTTAAAGGTTTGTGCTCACCAAAATTTCTCTGCTCTCACCACTGTTCTTGCTGTTAACTACTTCGATCGGTTCGTCCAAAGTCTGAACTTCCAGCGAGATAAGCCATGGACGACACAGCTTGCTGTAGTTGCTTGTTTACATGTGGCTGTGAAAATGGAGGAGTCCCAAGCGTCACATCTCTTAGACCTTCAAGCGGAGGAATCGAAGTACGAATTCAAAGCAAAGGATTTAAAGAGAATGGAGCTTCTAGTGTTAACAACTCTCCAATGGAGGATGAATCCTGTGACTCCAATCTCCTTCTTCGAACACACTGTGAGAGCACTCCGTTTAAAGAGCCACCTGCATTACGAATTCCTCTGGCGATGCGAACGCGTTCTGCTTTTAGTGCTTGCGGATTCAAAGGTCATGAGTTATCTTCCCTCCATAATTGCTGCTGCTACAATGGTCCATGTTATGCGGGAGATTGAACCATTTAATGTAGTGGAATGCAGAAACCAGCTCTTGGCTTTGCTCAAAATCAGCGAGGAGGAACAAGTGAACCAGTGTTATGAACTTGTTCTGGGAATACTATGTTGTCACCAAGACGTTCAAAATCTTCACGGCAGACGCAAGCGCCGATCTGAACCGAGAAGCCCAAATGGTGTGATTGATGTGTTCTTTAACAATGATAGTTCAAATGATTCGTGGGCTTCAGGAACAGTCTCAGTTGCAGAGGAGCCAGTGTTGAAGAAGAACCGATCTCAGGAGCAGCCTATGCAATTGCCTGCTCTAAGCCGCTCATATTGA 1056 0.4536 MILTKDAQNSLSLDALLCEEDGLTEDGTEGGRYREKSPSLPLILSDNNVFLDDDVLASLISKERGTHFGPGNLLIDEPLKEAREEAVLWVLKVCAHQNFSALTTVLAVNYFDRFVQSLNFQRDKPWTTQLAVVACLHVAVKMEESQASHLLDLQAEESKYEFKAKDLKRMELLVLTTLQWRMNPVTPISFFEHTVRALRLKSHLHYEFLWRCERVLLLVLADSKVMSYLPSIIAAATMVHVMREIEPFNVVECRNQLLALLKISEEEQVNQCYELVLGILCCHQDVQNLHGRRKRRSEPRSPNGVIDVFFNNDSSNDSWASGTVSVAEEPVLKKNRSQEQPMQLPALSRSY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4603g00042 351 CDD CYCLIN_AtCycD-like_rpt2 185 276 - -
Pral4603g00042 351 PANTHER CYCLINS 55 276 IPR039361 -
Pral4603g00042 351 Gene3D - 80 183 - -
Pral4603g00042 351 Pfam Cyclin, N-terminal domain 78 183 IPR006671 -
Pral4603g00042 351 SUPERFAMILY Cyclin-like 169 281 IPR036915 -
Pral4603g00042 351 Pfam Cyclin, C-terminal domain 185 287 IPR004367 -
Pral4603g00042 351 FunFam D6-type cyclin 72 183 - -
Pral4603g00042 351 CDD CYCLIN_AtCycD-like_rpt1 82 180 - -
Pral4603g00042 351 SMART Cyclin_C_2 185 304 IPR004367 -
Pral4603g00042 351 SMART cyclin_7 88 176 IPR013763 -
Pral4603g00042 351 Gene3D - 184 274 - -
Pral4603g00042 351 MobiDBLite consensus disorder prediction 336 351 - -
Pral4603g00042 351 MobiDBLite consensus disorder prediction 330 351 - -
Pral4603g00042 351 SUPERFAMILY Cyclin-like 50 183 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4603g00042 Pral-Chr4603 227871 229644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4603g00042 13 349 Core Cell Cycle Gene Families AT5G67260 44.568 3.91e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4603g00042 K14505 - qsa:O6P43_024601 384.03